Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03518 ATGTCGACGGTATACGTTTTGGAACCGCCGACGAAGGGGAAGGTGGTTGTCAACACAACGCGGGGCCCACTCGACATCGAGCTATGGCCGAAGGAAGCACCCAAAGCTGTCAGGAACTTCGTTCAGCTCTGCATGGAAGGTTACTACGACAACACCATCTTCCATCGCGTCATCAAGGACTTTCTTGTTCAGGGTGGTGATCCCACCGGCACCGGCACTGGAGGTGAGAGTATTTATGGGGATGTTTTTGCCGATGAGTTTCATTCGCGTCTGAAATTCAAGCACAGAGGATTGGTTGCAATGGCCAATGCTGGGCCACCTAATTCAAATGGGAGTCAGTTTTTCATTACCCTTGACCGTTGTGACTGGCTTGATCGGAAGCATACTATTTTTGGAAAGGTAACAGGAGATACAATGTATAATCTTTTAAGGCTGGGTGAAGTTGAAACTGACAAAAACGACCGGCCTTTAGATCCACCTCCAAAGATATTATCAGTTGAGGTATTATGGAACCCATTTGAAGATATTGTGCCAAGAAATCTTCAGACTAAAGCTACACCTGTTACAGAAAATAAAGGTTTGAAGACAAAGGGTGTGAAAAAATTGAACTTGCTTTCGTTTGGGGAAGAAGCTGAAGAAGAAGAAAAGGAATTGGCATTGGTGAAGCAAAAGATTAAGAGCAGTCATGATGTCTTGAATGATCCTCGTCTTTTGAAGGAAGAAACTCCCAACAATGAAATGAGTAAAGCAACAAGGGATTTGCAGTTAACTGTAAGAGATGCACTAAAAACCAAGAAGGAAGAGCCTCAGAAAGAGTTAGAAACTAGTAAAATTGATTCCAGTGATGATGACGATGACGACGAAGACGATGGCAATGAAGCAGATTTTGATGCAAGAATGCGCAGGCGAATACTGAAAAAGCGGAAGGAGTTGGGTGACCTTCCTCCCAAGCCAAAGGTGCAAAATGTATGTGATTGGGTTTTTCTTCCTGCCAGGTCAAATGCTTCACGGGTGGTTGATGATGATGATGATGATGATGATGATAAACCGAGGGCGGAAAAGTTGTCCTTGAAGAAGAAGGGAATAGGGTCTGAAGCAAGAGCTGAACGTATTGCTAATGCTGATGCAGATTTGCAGCTACTGAATGAAGCTGAGAGAGGAAGACAGTTGCAGAAACAGAAGAGACGCAGATTACAAGGGCGTGAAGATGATGTTCTTGCCAAACTCGAGAAATTCAAAAATTCCTTATCAGCAAAGTCGGCACCCAAAGCCAGTGAATCTAGTGATGTTGTTGATGACAAAGAACTGTCTGACTGGAAAAGTGTTGGCTTAAAATTTGCCCCGGAGTCTGGCAAGGATCGCATGTCTCGCAACGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAACAAAAGAGACGAGAACGCGAGTGGGCTGGGAGATCCCTCACGTGATTCTGTATGTGTGCCAACTAAGCCATTTAAATACACAAAGCTGACTGGTTTGGGAGACACAGGACACTTCCCGGCACCGGCGGAACACAATGTATATCAAGCTTGCCAAACTTAG 1674 0.4122 MSTVYVLEPPTKGKVVVNTTRGPLDIELWPKEAPKAVRNFVQLCMEGYYDNTIFHRVIKDFLVQGGDPTGTGTGGESIYGDVFADEFHSRLKFKHRGLVAMANAGPPNSNGSQFFITLDRCDWLDRKHTIFGKVTGDTMYNLLRLGEVETDKNDRPLDPPPKILSVEVLWNPFEDIVPRNLQTKATPVTENKGLKTKGVKKLNLLSFGEEAEEEEKELALVKQKIKSSHDVLNDPRLLKEETPNNEMSKATRDLQLTVRDALKTKKEEPQKELETSKIDSSDDDDDDEDDGNEADFDARMRRRILKKRKELGDLPPKPKVQNVCDWVFLPARSNASRVVDDDDDDDDDKPRAEKLSLKKKGIGSEARAERIANADADLQLLNEAERGRQLQKQKRRRLQGREDDVLAKLEKFKNSLSAKSAPKASESSDVVDDKELSDWKSVGLKFAPESGKDRMSRNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRDENASGLGDPSRDSVCVPTKPFKYTKLTGLGDTGHFPAPAEHNVYQACQT 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03518 557 Gene3D - 2 183 IPR029000 -
Aip06g03518 557 SUPERFAMILY Cyclophilin-like 14 182 IPR029000 -
Aip06g03518 557 Coils Coil 457 459 - -
Aip06g03518 557 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Aip06g03518 557 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Aip06g03518 557 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Aip06g03518 557 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Aip06g03518 557 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Aip06g03518 557 MobiDBLite consensus disorder prediction 499 521 - -
Aip06g03518 557 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 168 IPR002130 GO:0000413|GO:0003755
Aip06g03518 557 MobiDBLite consensus disorder prediction 279 293 - -
Aip06g03518 557 CDD cyclophilin_CeCYP16-like 8 179 - -
Aip06g03518 557 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Aip06g03518 557 MobiDBLite consensus disorder prediction 294 315 - -
Aip06g03518 557 MobiDBLite consensus disorder prediction 256 278 - -
Aip06g03518 557 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 5 197 IPR044666 -
Aip06g03518 557 Coils Coil 204 224 - -
Aip06g03518 557 Coils Coil 381 401 - -
Aip06g03518 557 PANTHER SPLICEOSOME-ASSOCIATED PROTEIN CWC27 HOMOLOG 5 197 - -
Aip06g03518 557 MobiDBLite consensus disorder prediction 234 355 - -
Aip06g03518 557 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 159 IPR002130 GO:0000413|GO:0003755
Aip06g03518 557 Coils Coil 505 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03518 Aip-Chr6 132411707 132417575 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03518 9 173 U-box Gene Family AT5G67530 48.485 1.85e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03518 K12737 - gmx:100793148 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03518 06 132411707 132417575 Aip06g03518 06 132411707 132417575 ECH