Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03517 ATGCCTCGATTATTAACGATGGTGGCTGTAGACAAAGATAAGAACAGTGTTGATGCATTTCGTTGGGCCACTGAGAATATTGATAATCCAATCGTTATTGCTGTTCATGTCAAGGATAAAGAAATTCCTCATCAGGGCAAGAATGTTTTCCCACCTGACGACGAAGATTTAGAAAATATTTTCAATCAATTGCGTCAAGAGTGTCATCCTAAAGTCCTAAAGATGAAAGAAGCTGTAATATATGATAGTGATCCAGTTAAAGCAATAATAGAATATGCAGAAAGGAATCGTGTCCATACCCTTGTTCTTGGTGCACCCACCGGCTCCAACAAGAAGAACACTCTGGCAAAATCTCTTTCTCTTCAATTCACTAAGTCATCAAGCAAGAAAGTGAAAGGCATAGAAGTAGCAACAGGTGTAATGAGAGCAGCACCGGAATACATATCAGTGTATGTAATTAAAAAGGGAAAGATAGTGGCAGCAAGAGCATCAACACACCCATTGATTGGGGCAATACCACCAAGACAATCTAGTGTTGATTCTCTTCAATATGACTTGGAAAATAAAAGGGCATCATTAGTACCACCACAATTGATTAGAGGATTAAGCACCAACAGTTGTAGTAGATCTGAAAGAATAACGAATGATAACATGAGAAGGAGATTTTCAAGGTTGGATTCAATGGCGGAGAGCGTTGACCTAACTAGTTATCGACAAAGGTTATCAATGACCCATGATGAATCATCAAAAGCCTTTGACTTCAATTACTCTCCTTCTAATAATTGGGTCATTGATGATTCTTCCGACAAAATCTCTCCTATCACAAATTCCCCCCAAACGTTGAAAAGCTCAAGATCCAAAAGAGAAAAGAGTGACGTTGAAGCTGAGATGAATCAATTGAAGCAAATGCTGAAGCAAACTATGGACTTGTACAGTGTAGCTTGCAAAGAAGCAATTGCAGCCCAAAATAAGGCTAGAGAAATTAATCAATGGAAATTGAAAGAGGCGCCTAAGATTGAGCAAGCTAGGCTAGCCGAAGAGGCGGCCATGGCGTTAGCCGAGGAGGAGAAGGCTAAGGCGAAGGCGGCGATGGAAAAGGCGGATGAAGCCATGAAAATGGCTGAAGAAGAAGCAAAGAAAAGAGCAGAAGCAGAGAGGAAGGCTAAATTGGAGGCAGAAGAGAAAGAGAGGGCCTTAAATGTTTTGGCTTATAAGGATTTTAGGTACAGGAAATACACCATTGGGGACATTGAAAAAGCTACTAATAATTTCTCCCTATCATTGAGAATTGGTGAAGGTGGATATGGACCTGTCTTTAAAGGCCAACTTGATCATACCCCTGTTGCTATCAAAATTTTGAGACCTGATGCTTCACAGGGCAGGAGACAGTTTCATCAAGAGGTTGAGGTATTATGCAGCATTAGGCATCCTAATATGGTCCTTCTCCTTGGTGCTTGCCCTGACTATGGATGCTTAGTGTATGAATTCATGGATAATGGTAGCTTAGAAGATAGATTAATCCGAAAAAATAATACCCCTCCTCTCTCATGGCCAAAACGGTTTGAAATAGCGGCCGAGATAGCGACCGCGCTACTCTTTCTTCATCAGGCTAAACCGGAGCCAATCGTGCACCGAGATCTTAAACCGGCCAACATTCTCCTCGACCGGAATTTCGTAAGCAAAATAAGTGACGTCGGCCTAGCCAGACTAGTGCCGCCGTCCGTGGCCGACTCCGTGACACAATACTACATGACCACGGCCGCCGGCACCATGCATTATATTGATCCGGAGTACCAACAAACCGGAAAACTAACAACAAAATCGGATGTATACTCATTGGGAATAATGTTACTTCAAATAATAACGGCTAAGCCTCCACTAGGGTTAACTCATCAAGTTAAAAGGGCAATTGAAAAGGGTCAATTTTCTAATATTCTTGATCCTTCCATAAATGATTGGCCAGTTGAAGAGGCACTAAGCTTTGCTAAATTGGCATTGCAATGTTCGGAGCTAAGAAAAAAAGATAGGCCAAATCTTGGAACAGTTGTAGTGCCAGAATTGGATCGTTTAAGAAACTTTGGATATGAATCAATTGGCCATAACAATATTCTTCCTTTTAGCAACTTCTATCATGCAACATCATTACTCCCACCTCGTTCACCTACACAAGTCATCAACAATATTTAA 2187 0.4129 MPRLLTMVAVDKDKNSVDAFRWATENIDNPIVIAVHVKDKEIPHQGKNVFPPDDEDLENIFNQLRQECHPKVLKMKEAVIYDSDPVKAIIEYAERNRVHTLVLGAPTGSNKKNTLAKSLSLQFTKSSSKKVKGIEVATGVMRAAPEYISVYVIKKGKIVAARASTHPLIGAIPPRQSSVDSLQYDLENKRASLVPPQLIRGLSTNSCSRSERITNDNMRRRFSRLDSMAESVDLTSYRQRLSMTHDESSKAFDFNYSPSNNWVIDDSSDKISPITNSPQTLKSSRSKREKSDVEAEMNQLKQMLKQTMDLYSVACKEAIAAQNKAREINQWKLKEAPKIEQARLAEEAAMALAEEEKAKAKAAMEKADEAMKMAEEEAKKRAEAERKAKLEAEEKERALNVLAYKDFRYRKYTIGDIEKATNNFSLSLRIGEGGYGPVFKGQLDHTPVAIKILRPDASQGRRQFHQEVEVLCSIRHPNMVLLLGACPDYGCLVYEFMDNGSLEDRLIRKNNTPPLSWPKRFEIAAEIATALLFLHQAKPEPIVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADSVTQYYMTTAAGTMHYIDPEYQQTGKLTTKSDVYSLGIMLLQIITAKPPLGLTHQVKRAIEKGQFSNILDPSINDWPVEEALSFAKLALQCSELRKKDRPNLGTVVVPELDRLRNFGYESIGHNNILPFSNFYHATSLLPPRSPTQVINNI 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03517 728 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 4 704 - -
Aip06g03517 728 Gene3D HUPs 6 154 IPR014729 -
Aip06g03517 728 CDD STKc_IRAK 430 690 - -
Aip06g03517 728 Coils Coil 350 401 - -
Aip06g03517 728 PANTHER OS02G0152300 PROTEIN 4 704 - -
Aip06g03517 728 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 121 - -
Aip06g03517 728 Gene3D Phosphorylase Kinase; domain 1 403 496 - -
Aip06g03517 728 Pfam Universal stress protein family 7 110 IPR006016 -
Aip06g03517 728 ProSiteProfiles Protein kinase domain profile. 424 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03517 728 SUPERFAMILY Protein kinase-like (PK-like) 407 683 IPR011009 -
Aip06g03517 728 MobiDBLite consensus disorder prediction 266 291 - -
Aip06g03517 728 Gene3D Transferase(Phosphotransferase) domain 1 497 697 - -
Aip06g03517 728 Coils Coil 283 310 - -
Aip06g03517 728 MobiDBLite consensus disorder prediction 266 282 - -
Aip06g03517 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 542 554 IPR008271 GO:0004672|GO:0006468
Aip06g03517 728 SMART serkin_6 424 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03517 728 Pfam Protein kinase domain 429 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03517 Aip-Chr6 132403974 132410728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03517 75 694 Receptor kinase-like Gene Family AT5G12000 56.013 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Aip06g03517 Pkinase 2.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03517 - - aip:107647694 1338.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03517 06 132403974 132410728 Aip06g03517 06 132403974 132410728 ECH
Aip06g03517 06 132403974 132410728 Aip07g03417 07 123939926 123943733 ECH