Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03515 ATGAGTAGTAGTACTAAGAAGACAACATGGAAATCTATGATGTTGATCCTAAGTTGTTGCAATTGCAAGAGTGAATGCAATTTGGAAATGGAGGAAGAAGAAGAATCAGAGAAGAAAAAATTGAAACAAGGTTCATTCCAGAGGCTATGTTTATCAGATGTAAGCAATTCAAGTTCATCACAAGCAATTGAAGATCTTTCAGTGTCACTAGCTGGATCAAAGCTTTATGCATTCACACTTGAGGAGTTAAGAGAAGCAACAAACAATTTCTCATGGAGTAACATGCTTGGTGAAGGTGGTTTTGGTCCTGTTTACAAAGGCTTCTTTGATGATAAACTTAGGCATGATTTGAAGCCTCAAACTGTTGCTGTTAAAAGATTGGACTTAGAAGGCTTGCAAGGTCATAGGGAGTGGCTGGCAGAGATTATATTTCTGGGGCAGTTAAGACATCCACATCTTGTTAAGTTAATTGGTTATTGTTATGAGGATGAGAACAGGCTTTTGGTGTATGAATACATGCCAAGAGGAAGCTTGGAGAATCAACTCTTCAGAAGGTACTCTGCTGCCATGCCATGGTCAACAAGGATGAAAATTGCATTAGGAGCAGCAAAGGGATTGGCCTTCCTTCATGGAGCAGATAAACCTGTAATATATAGGGATTTCAAAGCTTCAAATATCTTACTAGACTCAGTAAGTTCTATATAA 705 0.383 MSSSTKKTTWKSMMLILSCCNCKSECNLEMEEEEESEKKKLKQGSFQRLCLSDVSNSSSSQAIEDLSVSLAGSKLYAFTLEELREATNNFSWSNMLGEGGFGPVYKGFFDDKLRHDLKPQTVAVKRLDLEGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEDENRLLVYEYMPRGSLENQLFRRYSAAMPWSTRMKIALGAAKGLAFLHGADKPVIYRDFKASNILLDSVSSI 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03515 234 Pfam Protein tyrosine and serine/threonine kinase 92 230 IPR001245 GO:0004672|GO:0006468
Aip06g03515 234 PANTHER KINASE 1B 29 230 - -
Aip06g03515 234 ProSiteProfiles Protein kinase domain profile. 90 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03515 234 PIRSF ILK 3 52 - -
Aip06g03515 234 PIRSF ILK 79 234 - -
Aip06g03515 234 Gene3D Transferase(Phosphotransferase) domain 1 173 233 - -
Aip06g03515 234 PANTHER OS01G0588500 PROTEIN-RELATED 29 230 - -
Aip06g03515 234 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Aip06g03515 234 SUPERFAMILY Protein kinase-like (PK-like) 67 230 IPR011009 -
Aip06g03515 234 Gene3D Phosphorylase Kinase; domain 1 50 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03515 Aip-Chr6 132383587 132386295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03515 77 229 Glycoside Hydrolase AT3G07070 52.564 5.59e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip06g03515 PK_Tyr_Ser-Thr 9.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03515 - - lja:Lj5g3v0469100.1 375.555