Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03514 ATGGCACCAAAACCTACCAAGGCTGAGAAGAAGATCGCTTACGATGCTAAGCTCTGCAAGCTTCTCGAGGAATACACTCAGATCCTTGTTGTCAATGCCGATAACGTTGGATCTAACCAGCTCCAGAACATTCGCAGGGGTCTTCGTGGTGATTCCATTGTTCTTATGGGCAAGAACACCATGATGAAGCGTTCTGTTAGGATGCACGCTGAGAGTACTGGAAACAATGTGTATCTCAGCCTTATCCCCCTTCTTGTTGGAAACGTGGGATTGATCTTCACTAAAGGTGACTTGAAGGAGGTTAGCGAAGAGGTTGCTAAGTACAAGGTTGGAGCACCGGCTCGTGTTGGTTTGGTTGCTCCGATTGATGTTGTTGTTCCTCCGGGCAACACAGGGCTTGACCCCTCACAGACCTCTTTCTTCCAGGTATGTAATTTTGTTTTTGTTTATATAATTTATTCTGATTGTTGGTTTGTTGCTTATATCAGTCTTCCAATTCAGGTGCTGAACATTCCAACTAAGATTAACAAGGGTACTGTCGAAATTATCACCCCTGTAGAACTTATTAAGAAGGGTGACAAGGTTGGCTCTTCTGAAGCTGCATTGCTTTCCAAGCTTGGCATCAGGCCCTTCTCATATGGTCTTGTTGTCCTTTCTGTGTATGACAACGGTTCAGTGTTTAGCCCTGAGGTTCTTGACCTCACTGAGGATGACCTTGTTGAGAAGTTTGCCGTTGGAGTCTCGATGGTGACCGCACTCTCATTGGCCATCTCATACCCAACACTTGCTGCTGCCCCACATATGTTCATCAATGCCTACAAGAATGATCCAAGCAAATTTGCTGTGGCTGCTGTTGCTGCTCCTGCTGCTGCCGCCGGTGGTGCGCCAGCTGCTGCTGCCAAGGAAGAGGAAAAGAAGGAAGAGCCTGCTGAAGAATCTGATGATGACATGGGCTTCAGTTTAACTCAGAGCCAACCCGGCGATTCGGCGATCGACGCCACCGACCGGTTCATCAGAATGGTGGCCTCCGCCGCAGTCGCCGGCGTCTCTATGACGGCGCATCAGCGCAATATTCTAGCTGGTGTTAACGCCGGCGCTTCGAGCCTCTCGTTCGTTGGTTCAGGCTTCATCGTTCTCTGCTATCTCCTCTTCAAGGAGCTCCGCAAGTTCTCCTTCAAGCTCGTCTTCTACCTCGCCCTCTCCGATATGCTTTGCAGTTTCTTCAGCATAGTAGGGGATCCATCAAAAGGTTTCTTTTGCTCTGCTCAGGGCTATAGCACACATTTCTTTTGTGTGGCATCTTTCCTATGGACCACAACAATTGCTTTTACCCTGCATCGAACTGTTGTTAAGCACAAAACAGATGTTGAAGAGTTTGAGGCAATGTTTCACTTGTATGTCTGGGGTACTTCCCTGGCTATGACAGTTATACGTTCATTTGGTAATGATCATAGACATCTTTCTGCATGGTGTTGGACTCAATCAGGACTTGCAGGGAAGGCAATTCATTTGTTAACATTTTACATGCCACTCTGGGGTGCTATACTATATAATGGGTTCACATACTTCCAAGTTATACGCATGCTGAACAATGCAACCCGTATGGCAGTTGGTATGTCAGGCCAACCTTATGCATCAGATGCACGGGATAACATGAGGGCTCTAAATCGCTGGGGATACTATCCACTGATTCTAATAGGATCATGGGCTTTTGGAACCATTAACCGTATTCATGATTTCTTTGAACCCAACCATAAGATCTTCTGGCTCTCATTTCTAGATGTCGGAATGGCTTCTCTTATGGGCCTCTTTAATTCAATTGCATATGGCCTTAATTCTTCTGTTCGTCGAGCAATTTGTGAAAGAGTGGACAAGTATTGGCCTGAGGGTCTTAAGAGATGGCTCCCTATCAATTTCAAGTACAAGGCCTTAACGCAAGAAAGTGAACTAGTATTGTTAAGTACTGATGGTCAGCGATAA 1980 0.4631 MAPKPTKAEKKIAYDAKLCKLLEEYTQILVVNADNVGSNQLQNIRRGLRGDSIVLMGKNTMMKRSVRMHAESTGNNVYLSLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVCNFVFVYIIYSDCWFVAYISLPIQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLVEKFAVGVSMVTALSLAISYPTLAAAPHMFINAYKNDPSKFAVAAVAAPAAAAGGAPAAAAKEEEKKEEPAEESDDDMGFSLTQSQPGDSAIDATDRFIRMVASAAVAGVSMTAHQRNILAGVNAGASSLSFVGSGFIVLCYLLFKELRKFSFKLVFYLALSDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEEFEAMFHLYVWGTSLAMTVIRSFGNDHRHLSAWCWTQSGLAGKAIHLLTFYMPLWGAILYNGFTYFQVIRMLNNATRMAVGMSGQPYASDARDNMRALNRWGYYPLILIGSWAFGTINRIHDFFEPNHKIFWLSFLDVGMASLMGLFNSIAYGLNSSVRRAICERVDKYWPEGLKRWLPINFKYKALTQESELVLLSTDGQR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03514 659 Gene3D - 114 210 IPR043164 -
Aip06g03514 659 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 166 275 - -
Aip06g03514 659 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 146 - -
Aip06g03514 659 Pfam 60s Acidic ribosomal protein 277 321 - -
Aip06g03514 659 Gene3D - 6 234 IPR043141 -
Aip06g03514 659 PRINTS Putative plant GPCR, GCR1, signature 585 602 IPR022340 -
Aip06g03514 659 PRINTS Putative plant GPCR, GCR1, signature 603 619 IPR022340 -
Aip06g03514 659 PRINTS Putative plant GPCR, GCR1, signature 555 576 IPR022340 -
Aip06g03514 659 PRINTS Putative plant GPCR, GCR1, signature 422 435 IPR022340 -
Aip06g03514 659 PRINTS Putative plant GPCR, GCR1, signature 376 390 IPR022340 -
Aip06g03514 659 PRINTS Putative plant GPCR, GCR1, signature 499 511 IPR022340 -
Aip06g03514 659 PRINTS Putative plant GPCR, GCR1, signature 512 535 IPR022340 -
Aip06g03514 659 PRINTS Putative plant GPCR, GCR1, signature 359 374 IPR022340 -
Aip06g03514 659 PRINTS Putative plant GPCR, GCR1, signature 392 414 IPR022340 -
Aip06g03514 659 PRINTS Putative plant GPCR, GCR1, signature 437 455 IPR022340 -
Aip06g03514 659 PRINTS Putative plant GPCR, GCR1, signature 460 475 IPR022340 -
Aip06g03514 659 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 276 321 - -
Aip06g03514 659 Pfam Ribosomal protein L10 7 108 IPR001790 -
Aip06g03514 659 MobiDBLite consensus disorder prediction 296 328 - -
Aip06g03514 659 Pfam Insertion domain in 60S ribosomal protein L10P 166 208 IPR040637 -
Aip06g03514 659 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 276 321 - -
Aip06g03514 659 SUPERFAMILY Family A G protein-coupled receptor-like 347 621 - -
Aip06g03514 659 PRINTS GCR1-cAMP receptor family signature 370 388 IPR022343 -
Aip06g03514 659 PRINTS GCR1-cAMP receptor family signature 420 438 IPR022343 -
Aip06g03514 659 PRINTS GCR1-cAMP receptor family signature 561 579 IPR022343 -
Aip06g03514 659 PRINTS GCR1-cAMP receptor family signature 593 612 IPR022343 -
Aip06g03514 659 PRINTS GCR1-cAMP receptor family signature 389 404 IPR022343 -
Aip06g03514 659 CDD Ribosomal_P0_L10e 9 210 - -
Aip06g03514 659 ProSiteProfiles G-protein coupled receptors family 2 profile 2. 359 613 IPR017981 GO:0004888|GO:0007166|GO:0016021
Aip06g03514 659 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 166 275 - -
Aip06g03514 659 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 1 146 - -
Aip06g03514 659 Gene3D - 351 632 - -
Aip06g03514 659 SUPERFAMILY Ribosomal protein L10-like 8 133 IPR043141 -
Aip06g03514 659 Pfam Slime mold cyclic AMP receptor 366 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03514 Aip-Chr6 132358630 132373784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03514 1 321 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 71.802 1.14e-156 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03514 K22987 - gmx:100802104 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03514 06 132358630 132373784 Aip06g03514 06 132358630 132373784 ECH