Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03513 ATGATGCATATGACATTGTATTGGGGCAAGAAGGTAACACTTCTCTTCGATTCATGGAAGACCGAGTCATGGCTGAGTTACTCAATGAGTCTACTCGCTTGCCTTGTGGTGGCTGCACTCTACCAGTATCTCGAGAATCGAAGGATTCGCCTGAGACTCGCCGGCGAGAGGAGGCTGCCACCTGTGGCGGCGGCTATTCAGACACCACTTATGGGGTGGAAGATTTCAAGGGATAAGGCGAAGTTGGGTGGGAAGTTGATTGGATCGGTTCTTTTTGGTGTGAATTCTGGGATCGGGTACTTATTAATGCTTGCTATTATGTCCTTCAATGGTGGGGTTTTTGTGGCCATTGTTTTGGGGCTCTCAATTGGGTACTTGTTATTTAGGAGTGAGGTTTTTGAAGATGATGTTGGTGGTGTTGGTGATAGGACTTGTGCTTGTGCTTAA 447 0.472 MMHMTLYWGKKVTLLFDSWKTESWLSYSMSLLACLVVAALYQYLENRRIRLRLAGERRLPPVAAAIQTPLMGWKISRDKAKLGGKLIGSVLFGVNSGIGYLLMLAIMSFNGGVFVAIVLGLSIGYLLFRSEVFEDDVGGVGDRTCACA 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03513 148 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 148 IPR007274 GO:0005375|GO:0016021|GO:0035434
Aip06g03513 148 Pfam Ctr copper transporter family 4 128 IPR007274 GO:0005375|GO:0016021|GO:0035434
Aip06g03513 148 PANTHER CTR FAMILY COPPER TRANSPORTER 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03513 Aip-Chr6 132356728 132357548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03513 1 148 Inorganic Solute Cotransporters AT5G20650 54.545 1.72e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03513 K14686 - gmx:100795071 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03513 06 132356728 132357548 Aip06g03513 06 132356728 132357548 ECH
Aip06g03513 06 132356728 132357548 Aip09g01228 09 19229913 19236387 ECH
Aip06g03513 06 132356728 132357548 Aip10g02531 10 112209752 112210836 ECH
Aip09g01228 09 19229913 19236387 Aip06g03513 06 132356728 132357548 ECH