Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03496 ATGAAACAGAATCCACTCTACCTCCTTTTCTCGTCGTTTTCTCCCTTTAATCTCTCTCTCTCTCTCCTCCTTCCTCAGCTTCATTCCACTACCTTCACCCAACAAAAATCGCAAGATCTATCTACACAAACTCTCAACTCTTTTCCATTTTCCCCCGTCTCATGGGTAACAAAGTTAAACTTGGAAGTCAAAAGGGGATTAGTTTCTAAGGGCCCTGAAAAATTCAACCTGGAACACATGGGGTACCTCAATTCAGTTTTGACATCTTCAAGTCAGGTTCATGCAGCAGAAGATTCACCCGTGAGTGGTGGAGGACTCAGTCAGAATGGAAAATTCAGCTACGGGTATGCTAGCTCTCCGGGCAAGAGATCTTCGATGGAAGATTTTTATGAGACTAGAATTGATGGTGTGGATGGTGAAATCGTTGGCCTTTTCGGAGTTTTTGATGGTCACGGTGGTGCTCGTGCTGCCGAGTATGTCAAACAACATCTATTTAGTAATTTGCTCAGACATCCAAAATTCATTTCCGACACTAAATCTGCAATAGCTGATGCATATAACCACACAGACTCTGAATTTCTGAAATCAGAAAATAACCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATTCTAGTTGGTGACCGTTTGCTCGTTGCTAATGTCGGGGACTCTAGAGCTGTTATATGCAGGGGTGGAAATGCCATAGCTGTTTCCCGAGATCACAAGCCGGACCAAACGGACGAGAGGCAAAGGATTGAAAATGCTGGTGGCTTTGTTATGTGGGCTGGAACCTGGAGAGTTGGTGGCGTTCTTGCCGTTTCTCGTGCTTTCGGTGATAGACTTCTGAAACAGTATGTTGTTGCTGATCCAGAAATCCAGGAAGAAAAAGTTGATAGCTCTCTCGAGTTTCTTATCTTGGCCAGTGACGGGCTATGGGATGTTGTCTCCAACGAGGAAGCTGTTGCAATGATAAAGAAAATAGATGATGCAGAGGAGGCGGCAAAGAAGTTGATGCAAGAAGCATATCAGAGAGGTAGTTCCGACAACATTACTTGTGTTGTGGTTCGTTTCTTGACGAACCAAGGCGCTGCTTCTGGTACTAGCTCCGGCTAA 1119 0.4486 MKQNPLYLLFSSFSPFNLSLSLLLPQLHSTTFTQQKSQDLSTQTLNSFPFSPVSWVTKLNLEVKRGLVSKGPEKFNLEHMGYLNSVLTSSSQVHAAEDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGARAAEYVKQHLFSNLLRHPKFISDTKSAIADAYNHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIENAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKKIDDAEEAAKKLMQEAYQRGSSDNITCVVVRFLTNQGAASGTSSG 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03496 372 SMART PP2C_4 103 357 IPR001932 -
Aip06g03496 372 ProSitePatterns PPM-type phosphatase domain signature. 144 152 IPR000222 GO:0043169
Aip06g03496 372 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 82 366 - -
Aip06g03496 372 SUPERFAMILY PP2C-like 107 359 IPR036457 -
Aip06g03496 372 ProSiteProfiles PPM-type phosphatase domain profile. 113 359 IPR001932 -
Aip06g03496 372 Pfam Protein phosphatase 2C 142 352 IPR001932 -
Aip06g03496 372 CDD PP2Cc 112 359 IPR001932 -
Aip06g03496 372 Gene3D - 105 364 IPR036457 -
Aip06g03496 372 SMART PP2C_SIG_2 124 359 IPR001932 -
Aip06g03496 372 PANTHER ALPHABET, ISOFORM E-RELATED 82 366 - -
Aip06g03496 372 Coils Coil 322 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03496 Aip-Chr6 132070779 132075199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03496 80 371 PP2C-type Phosphatase Gene Family AT4G31750 89.726 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03496 K17506 - gmx:100795017 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03496 06 132070779 132075199 Aip06g03496 06 132070779 132075199 ECH