Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03477 ATGGTTTCTTCTCTGCTTCTGCTTCTTCTTACCATTTTCCCTTCAAATGTTGACCCATTACATTTCAATATAATAAATTTCAGTTCTGTTGAGAATGCAAGAAAAGATATGGCATATGAAGGTGATGCTAAAGTTGCCAACAACGGGTTCATAGAGCTCACCAGTTATGACTTCTATCGAACTGGAAGAACCATTTATGGCCAGCCTTTCCACCTTTGGGATTCATCCACTAAGGTTCTCACAGACTTCACAACCTCTTTTACATTCACTATTCACGGATCAGAATCCAATAGTAGTGTACTTGCTGATGGCTTTGCCTTCCACATGGCTCCTTTGAGTTTCACAACTCCACCCAACTCAGCCGGTGGCAATTTTGGACTATTCAACCTTTCCACACATTTTGGCATACCCCAAAATCAAATGTTTATGGTGGAATTTGACACATACCAAAATAAAGATTATGATCCTCTAGATCTAGAGCAACATGTTGGGATCAACAAAAATTCCCTCAAATCCATCAATTATACTAAGTTTGATATTGAAGGAAACAATGGGAAACAAGGTCATGCTTTAATTACCTATAATTCTTCTACCAAAAACCTTCTTGTGTCTTGGTCTTTCGATGGAGCTAGCACCCATACTCTGTCTTGTGAGATTGACCTCTCTGAAATCCTACCAGAGTATGTGACAGTTGGATTCTCAGCTGCAACTGGCCGCCGCTCGAAAACACAACACAACATTCATTCTTGGGAATTCAACTCAACTTTGGATTCCACCGATTCTGAGGTAAACAGAAAGAAGAGGCAAAAAAGGATCATAGAAATTGTTGCAATGACTTGCTCAATAATTGTCTTGGTGCTTATGGTATGTGTTTGTCTTATCAAGAAAAGAATTGCCAAGCTTCTACATGATGATGGCAACAGCAGATACAAAGTAGTCGCCAATGACTTGGACGAAGCATCACTACCTAGAAGATTCGAGTACAAGGAATTAGCTCAAGCTACCAATGAGTTCTCAAATGATAGAAAGCTTGGAAGTGGAGGATCAAGTCAAGTTTACAAAGGTTTTCTAAGTCACTCAGGACGTGCGGTCGCAGTTAAGAGGATTTTCGCTGATATTCAAGGAGGCGAGAAAATATTCATCAATGAAGTGAAGATAATAAGCCGTCTTATACACAGAAACTTGGTGCAATTCATAGGGTGGTGCCACAACAAACAAGAGTTCTTCCTAGTTTTTGAGTACATGCCTAATGGAAGCCTAGACACTCATCTCTTTGGAAATAGAAGAGCTTTGCCTTGGGATGCAAGGTATAAGATAGCTTTAGGTGTGGCCACGGCACTTCATTATCTTCATGAAGATGCAGAACAATGTGTTCTTCATAGAGATATTAAGTCTGCTAACATTCTATTGGACACAGATTTTAGCACCAAGCTTTGTGATTTTGGCATGGCAAAATTGGTAGACCCAAGATTGAAGACTCAAAGGACAGGAGTTGTAGGGACATATGGGTACTTGGCACCAGAATATCTCAATGGAGGAAGGGCTAGCAAAGAATCAGACATATATAGTTTTGGGATTGTAGCTTTGGAAATTGCATGTGGAAGGAAGACTTACCAAGATGGAGAATATCATATTCCTCTAGTAAAGTGGGTATGGCAACTCTATGTGGAAGGGAATATTCTGAATGTTGCTGATGAAGGATTGAACAAGAATTTTGATGAACTTCAAATGACATGCTTGCTTATAGTAGGACTATGGTGTACCAACCCGAATGCCAAGGAAAGGCCGAAAGCAGCACAAGTGATCAAGGTTCTTCAGCTTGAATCGCCGCTACCTGCACTTCCACATGATATGCATGATCATCCTCTTCAACCAACCATGGAGAATTTTAGAAATTCTTCTCAATCATCACCCATCACAAATAGCCTTGTCAATGATGGACGTTAG 1947 0.4022 MVSSLLLLLLTIFPSNVDPLHFNIINFSSVENARKDMAYEGDAKVANNGFIELTSYDFYRTGRTIYGQPFHLWDSSTKVLTDFTTSFTFTIHGSESNSSVLADGFAFHMAPLSFTTPPNSAGGNFGLFNLSTHFGIPQNQMFMVEFDTYQNKDYDPLDLEQHVGINKNSLKSINYTKFDIEGNNGKQGHALITYNSSTKNLLVSWSFDGASTHTLSCEIDLSEILPEYVTVGFSAATGRRSKTQHNIHSWEFNSTLDSTDSEVNRKKRQKRIIEIVAMTCSIIVLVLMVCVCLIKKRIAKLLHDDGNSRYKVVANDLDEASLPRRFEYKELAQATNEFSNDRKLGSGGSSQVYKGFLSHSGRAVAVKRIFADIQGGEKIFINEVKIISRLIHRNLVQFIGWCHNKQEFFLVFEYMPNGSLDTHLFGNRRALPWDARYKIALGVATALHYLHEDAEQCVLHRDIKSANILLDTDFSTKLCDFGMAKLVDPRLKTQRTGVVGTYGYLAPEYLNGGRASKESDIYSFGIVALEIACGRKTYQDGEYHIPLVKWVWQLYVEGNILNVADEGLNKNFDELQMTCLLIVGLWCTNPNAKERPKAAQVIKVLQLESPLPALPHDMHDHPLQPTMENFRNSSQSSPITNSLVNDGR 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03477 648 ProSitePatterns Legume lectins alpha-chain signature. 225 234 IPR000985 -
Aip06g03477 648 CDD lectin_legume_LecRK_Arcelin_ConA 20 256 IPR001220 GO:0030246
Aip06g03477 648 SMART serkin_6 338 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03477 648 Gene3D Phosphorylase Kinase; domain 1 323 414 - -
Aip06g03477 648 SUPERFAMILY Protein kinase-like (PK-like) 322 634 IPR011009 -
Aip06g03477 648 Pfam Protein kinase domain 339 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03477 648 MobiDBLite consensus disorder prediction 619 648 - -
Aip06g03477 648 PANTHER - 5 621 - -
Aip06g03477 648 Pfam Legume lectin domain 21 263 IPR001220 GO:0030246
Aip06g03477 648 Gene3D Transferase(Phosphotransferase) domain 1 415 621 - -
Aip06g03477 648 MobiDBLite consensus disorder prediction 626 648 - -
Aip06g03477 648 ProSiteProfiles Protein kinase domain profile. 338 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03477 648 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 259 IPR013320 -
Aip06g03477 648 PANTHER PUTATIVE-RELATED 5 621 - -
Aip06g03477 648 Gene3D - 18 270 - -
Aip06g03477 648 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Aip06g03477 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03477 Aip-Chr6 131932100 131934046 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03477 1 618 Receptor kinase-like Gene Family AT5G10530 43.899 5.61e-180 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aip06g03477 Pkinase 1.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03477 - - gmx:102662919 741.88