Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03476 ATGGTATCATATGAAGGTGATGCCATACCTTTTGAAGGGTCCATAGAGCTGAACATAAATGACATCAATCGAGTTGGACACGCAGTCTATAACGAACCTTTGCACCTTTGGGACTCATCAACCAAGGCTCTCACCGACTTCTCAACCGCTTTCTCATTCACCATTTCTCAGCCAACTAACAAAACCGCCGACGGCTTTGCCTTCTACATGGCACCTCTTGGCTACCAAATTCCACCCAACTCATATGGTGGCGCTCTTGGACTCTTCAACTCAACAACACAATATGGTGTAGTACAAAATCATGTTTTTATGGTGGAATTTGACACATTTATAAATCCTGAGTATGATCCCGGTGAACGTCATGTTGGGATCAACAGCAACTCTCTCAAATCCTTAACCTATGCTTGGTATGATTTTGAAGACAACATTGGCAAGAAAACTCATGCTTTGATTACTTATAATTCTTCCACCAAGATCCTTAATGTGTCTTGGTTTTTCAATGCTACTAGCACCAACACATTGTCCTATGAGATTGACCTTAGGGGAATCTTACCAGAGTATGTGACGGTTGGATTTTCAGCTGCAACTGGCCCTTTAGAGTTTGAGCGAAATGTTATTCATTCTTGGAATTTCATGTCAACTTTGGAGTCCATGGATTCTGAGGTAAACAAAAAGAAGAAGAAGAAGAAGCAAAAAATGGTTATAGTTGCAGTAGCTGCTTCAATTTTTTTAGTGCTGGTGATAGGTAGTGTCTATTGGTTGACCATAATCATCAAGAAGAGAAGAACCAAGCAAGTTCGAGATGATGATCTTGGAGGCACATTGGTGACTTCAGATCTTGGCAAAGCATCTATACCTAGAAGATTTGATTACAGAGAATTAGCTGCAGCCACTGATGGTTTCTCAAAAGATAAAAGGCTTGGAAGAGGAGGCTCTGGTGAAGTTTACAAAGGATTCCTAAAAGATTTAGGACGTTTTGTCGCTGTGAAAAAGATTTTCGCTGACTTTCAAAACTCTGAGAAAATATTCATCAATGAGGTGAAGATTATAAGTCGCCTTATACATAGAAATCTGGTACAATTCATAGGGTGGTGTCATGAGCAACAAGAGTTCTTATTAGTTTTCGAGTACATGCCTAATGGAAGCCTCGATACGCACCTCTTTGGCAGTAGAAGAACTTTGGCTTGGGATGTAAGGTACAAGATGGCACTAGGCATTGCCACAGCACTTCATTACCTTCATGAGGATGCAGAACAATGTGTACTGCATAGAGATATTAAGTCAGCTAATGTTTTGTTGGACACAGATTTCAGCACTAAGCTTGGCGACTTTGGGATGGCGAAGTTAGTAGACCCGACATTGAAGACTCAAAGGACAGGAGTTGTAGGGACATATGGGTACTTGGCACCAGAATATCTCAATGGAGGAAGGGCTAGCAAAGAATCAGATATATATAGTTTTGGGATTGTAGCTTTGGAAATTGCATGTGGAAGGAAGACTTACCAAGATGGAGAATATCATATTCCTCTAGTAAAGTGGGTATGGCAACTCTATGTGGAAGGGAATATTCTGAATGTTGCTGATGAAGGATTGAACAAGAATTTTGATGAACTTCAAATGACATGCTTGCTTATAGTGGGACTATGGTGTACCAACCCAAATGACAAGGAAAGGCCAAAAGCAGCACAAGTGATCAAGGTTCTTCAGCTTGAATCACCACTACCTGCACTTCCACATGATATGCATGATCATCGCCTTCGACCAACCATGGAGAATTTTAGAAATTCTTCTCAATCATCACCCATCACAAATAGCCTTGTCAATGATGGACGTTAG 1836 0.408 MVSYEGDAIPFEGSIELNINDINRVGHAVYNEPLHLWDSSTKALTDFSTAFSFTISQPTNKTADGFAFYMAPLGYQIPPNSYGGALGLFNSTTQYGVVQNHVFMVEFDTFINPEYDPGERHVGINSNSLKSLTYAWYDFEDNIGKKTHALITYNSSTKILNVSWFFNATSTNTLSYEIDLRGILPEYVTVGFSAATGPLEFERNVIHSWNFMSTLESMDSEVNKKKKKKKQKMVIVAVAASIFLVLVIGSVYWLTIIIKKRRTKQVRDDDLGGTLVTSDLGKASIPRRFDYRELAAATDGFSKDKRLGRGGSGEVYKGFLKDLGRFVAVKKIFADFQNSEKIFINEVKIISRLIHRNLVQFIGWCHEQQEFLLVFEYMPNGSLDTHLFGSRRTLAWDVRYKMALGIATALHYLHEDAEQCVLHRDIKSANVLLDTDFSTKLGDFGMAKLVDPTLKTQRTGVVGTYGYLAPEYLNGGRASKESDIYSFGIVALEIACGRKTYQDGEYHIPLVKWVWQLYVEGNILNVADEGLNKNFDELQMTCLLIVGLWCTNPNDKERPKAAQVIKVLQLESPLPALPHDMHDHRLRPTMENFRNSSQSSPITNSLVNDGR 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03476 611 Pfam Protein kinase domain 301 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03476 611 ProSitePatterns Protein kinases ATP-binding region signature. 307 331 IPR017441 GO:0005524
Aip06g03476 611 Gene3D - 1 230 - -
Aip06g03476 611 CDD lectin_legume_LecRK_Arcelin_ConA 2 215 IPR001220 GO:0030246
Aip06g03476 611 MobiDBLite consensus disorder prediction 591 611 - -
Aip06g03476 611 Pfam Legume lectin domain 3 223 IPR001220 GO:0030246
Aip06g03476 611 SMART serkin_6 301 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03476 611 Gene3D Transferase(Phosphotransferase) domain 1 378 595 - -
Aip06g03476 611 Gene3D Phosphorylase Kinase; domain 1 286 377 - -
Aip06g03476 611 SUPERFAMILY Protein kinase-like (PK-like) 285 593 IPR011009 -
Aip06g03476 611 PANTHER PUTATIVE-RELATED 3 585 - -
Aip06g03476 611 ProSitePatterns Legume lectins alpha-chain signature. 184 193 IPR000985 -
Aip06g03476 611 SUPERFAMILY Concanavalin A-like lectins/glucanases 4 215 IPR013320 -
Aip06g03476 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Aip06g03476 611 PANTHER - 3 585 - -
Aip06g03476 611 ProSiteProfiles Protein kinase domain profile. 301 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03476 Aip-Chr6 131929366 131931201 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03476 2 581 Receptor kinase-like Gene Family AT5G10530 46.050 1.51e-177 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aip06g03476 Pkinase 2.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03476 - - gmx:102662919 770.77