Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03475 ATGGTTTCTTCTCTGCTTTTGCTTCTTCTTACCCTTTTCCCTTCAAATGTTCACCCATTACATTTCAATATAACAGATTTCAGTGATGTTGAGAGTGCAAGCAAAGATATGGCATATGAAGGTGATGCCAAAGTTGCCAACGGGTTCATAGAGCTCAACAGGTATGACTACTATCGAACCGGCCGAGCCGTTTACAGCCAGCCTTTGCACCTTTGGGATTCATCCTCTAAGATTCTCACAGACTTCACAACCTCCTTTAGATTCACTATTCAAGGACCAGAATCCAATAGCAGTGATTATAATGTACTTGCTGATGGATTTGCCTTCCACATGGCTCCTTTGAATTTCACAACTCCACCCAACTCAGCTGGTGGCAATTTTGGACTATTCAACCTTTCCACACATTTTGGCATACCCCAAAATCAAATGTTTATGGTGGAATTTGACACATTCCAAAATAAAGATTATGATCCTCTAGAGCTAGAGCACCATGTTGGGATCAACGAAAATTCTGTCAAATCCATCAAGTATACTAAGTTTGATATTGAAGGAAACATTGGGAAACAAGGTCATGCTTTAATTACCTATAATTCTTCTACCAAGAACCTTGTTGTGTCTTGGTCTTTCAATGGAGCTAGCACTCATACTCTGTCTTGTGAGATTGACCTCTCCAAAATCCTACCAGAGTATGTGACAGTTGGATTCTCAGCTGCAACTGGCCACCGCTCGAACACACAACACAACATTCATTCTTGGGAATTCAATTCAACTTTGGATTCCACCGATTCTGAGGTAAACAGAAAGAAGAGGCAAAAAAGGATCATAGAAATTGTTGCACTGACTTGCTCAATAATTGTATTGGTGCTTATGGTATGTGTTTGTCTTATCAAGAAAAGAATTGCCAAGCTTCTACATGATGATCAAGTATCAGTCGCCAATGACTTGGACGAAGCATCACTACCTAGAAGATTCAAGTACAAGGAACTAGTTCAAGCCACCAATGAGTTCTCAAATGATAGAAAGCTTGGAAGTGGAGGATCAAGTCAAGTTTACAAAGGTTTTCTAAGTCACTCAGGACGTGCAGTCGCAGTGAAGAGGATTTTCGCTGATATTCAAGGAGGTGAGAAAATATTCATCAATGAAGTGAAGATAATAAGCCGTCTTATACACAGAAACTTGGTGCAATTCATAGGGTGGTGCCACAACAAACAAGAGTTCTTCCTAGTTTTCGAGTACATGCCTAATGGAAGCCTAGACACTTATCTCTTTGGAACAAGAAGAGCTCTGCCTTGGGATGCAAGGTACAAGATAGCTTTAGGTGTGGCCACGGCGCTTCATTATCTTCATGAAGATGCAGAACAATGTGTGCTTCATAGAGATATTAAGTCTGCTAACATTCTATTGGACACAGATTTTAGCACCAAGCTTTGTGATTTTGGCATGGCAAAATTGGTAGACCCAAGATTGAAGACTCAAAGGACAGGAGTTGTAGGGACATATGGGTACTTGGCACCAGAATATCTCAATGGAGGAAGGGCTAGCAAAGAATCAGACATATATAGTTTTGGGATTGTAGCTTTGGAAATTGCATGTGGAAGGAAGACTTACCAAGATGGAGAATATCATATTCCTCTAGTGAAGTGGGTATGGCAACTCTATGTGGAAGGGAATATTCTGAATGTTGCTGATGAAGGATTGAACAATAATTTTGATGAACTTCAAATGACATGCTTGCTAATTGTGGGACTATGGTGTACCAACCCGAATGACAAGGAAAGGCCGAAAGCAGCACAAGTGATCAAGGTTCTTCAACTTGAATCGCCGCTACCTGAGCTTCAACATGATATGCATGATCATCCTCTTCAACCAACCATGGTGAAGTTTAGAACTTCTTTTCAATCATCATCCATCAGCAATAGCCTTGTTATTGATGGACGTTAG 1941 0.406 MVSSLLLLLLTLFPSNVHPLHFNITDFSDVESASKDMAYEGDAKVANGFIELNRYDYYRTGRAVYSQPLHLWDSSSKILTDFTTSFRFTIQGPESNSSDYNVLADGFAFHMAPLNFTTPPNSAGGNFGLFNLSTHFGIPQNQMFMVEFDTFQNKDYDPLELEHHVGINENSVKSIKYTKFDIEGNIGKQGHALITYNSSTKNLVVSWSFNGASTHTLSCEIDLSKILPEYVTVGFSAATGHRSNTQHNIHSWEFNSTLDSTDSEVNRKKRQKRIIEIVALTCSIIVLVLMVCVCLIKKRIAKLLHDDQVSVANDLDEASLPRRFKYKELVQATNEFSNDRKLGSGGSSQVYKGFLSHSGRAVAVKRIFADIQGGEKIFINEVKIISRLIHRNLVQFIGWCHNKQEFFLVFEYMPNGSLDTYLFGTRRALPWDARYKIALGVATALHYLHEDAEQCVLHRDIKSANILLDTDFSTKLCDFGMAKLVDPRLKTQRTGVVGTYGYLAPEYLNGGRASKESDIYSFGIVALEIACGRKTYQDGEYHIPLVKWVWQLYVEGNILNVADEGLNNNFDELQMTCLLIVGLWCTNPNDKERPKAAQVIKVLQLESPLPELQHDMHDHPLQPTMVKFRTSFQSSSISNSLVIDGR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03475 646 Pfam Protein kinase domain 337 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03475 646 ProSitePatterns Protein kinases ATP-binding region signature. 342 365 IPR017441 GO:0005524
Aip06g03475 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Aip06g03475 646 SMART serkin_6 336 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03475 646 Gene3D - 18 282 - -
Aip06g03475 646 Gene3D Phosphorylase Kinase; domain 1 321 412 - -
Aip06g03475 646 SUPERFAMILY Concanavalin A-like lectins/glucanases 19 261 IPR013320 -
Aip06g03475 646 Gene3D Transferase(Phosphotransferase) domain 1 413 620 - -
Aip06g03475 646 CDD lectin_legume_LecRK_Arcelin_ConA 20 258 IPR001220 GO:0030246
Aip06g03475 646 ProSitePatterns Legume lectins alpha-chain signature. 227 236 IPR000985 -
Aip06g03475 646 Pfam Legume lectin domain 20 265 IPR001220 GO:0030246
Aip06g03475 646 ProSiteProfiles Protein kinase domain profile. 336 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03475 646 PANTHER - 5 619 - -
Aip06g03475 646 PANTHER PUTATIVE-RELATED 5 619 - -
Aip06g03475 646 SUPERFAMILY Protein kinase-like (PK-like) 320 627 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03475 Aip-Chr6 131926869 131928809 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03475 1 616 Receptor kinase-like Gene Family AT5G10530 43.602 9.30e-176 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aip06g03475 Pkinase 2.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03475 - - vra:106763732 739.184