Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03474 ATGATTGCTACGGCTGCTTCTAAAATTTCAATTTCAATGGCTTCTCTATCTTCTTCTCATCAGTTCTTCAATAATCTTGTTCCTTCTATTCTGCATCTACTTCTTCTAATCACCCTCTCTTCCCTTCCAATTTTGGTTCATCCATTATCCTTCAACATAACCAACTTCGATGACCCTGCTAGTGCAAGCCAAATGGCATACGAAGGTGATGCAAGATCCAGCAATGGATCCATCGACCTCAACAAAGTCATCTATGACTTCAGGGTTGGCCGTGCCATCTACGGCCAACCCCTTCACCTTTGGGATTCAGCCACCAAAATTCTCACAAGTTTCTCCACAAGCTTCACATTCACCATTGATGCAGTGAATGACACAAAGATCGGTGACGGTTTTGTGTTCTATTTGGCACCTCTTGGCTACCAAATCCCACCAAATTCAGCTGGTGGAACTTTTGCTCTCTTCAATCAAACAACCAATCTCGTCAACCAACCACAAAACCATGTTGTGGCGGTTGAGTTTGACACATTTATTGGCTCCATTGACCCACCATTTCAGCATGTGGGGATTGATGATAACTCTCTTACTTCCCTTGCTACTGCCAAGTTTGATGTTGACAAGAATCTTGGTGTCAAGTGTTTCGCTTTGATTTCTTACGAAGCTTCGACCAAGACACTCGCATTGTCCTGGTCGTTCGGTGGAAGCAGTCGCAATAAAACTATTGCGACTGCTTCCACTTCAAATTCGAATTCTCTGTCTTACAACATTGACCTCATGCAAGCTCTTCCAGAGTGGGTGAATTTCGGGTTTTCGTCCTCGACCGGGTTATCCACCGAGCGAAACGTTATCTATTCATGGCAGTTTCATTCAACTTTGGGTGGAGAAATGGGGAAGGTTCAAAACAAGAAGCTGAACATTGTTGTGGTGGTTGTCCCGGTGGTTGTTACGGTTGTTTTATTGACTGTGGTGGTGGTTGTTGGTCTCTTGATCATCAAGAAAAGGAGGAGGACTAATGAGGAAGGTGGTGGCGAATACCCTGGACAGTTCCCTGTCGAGTTTGACCTCGACAGAGCAACTATCCCAAGGAGATTCGACTACAAAGAATTGGTTGCGGCCACCAACGGTTTCGCCGAAGACAAGAGGCTGGGACAAGGAGGGTCAGGAGAAGTCTACAAAGGCGTCTTGAGCTATCTTGGAAGAGTTGTTGCCGTGAAGAGGATCTTCGCCGACTTCGAAAACTCGGAGAGAGTTTTCCACAACGAAGTAAGGATCATAAGCCGTTTGATCCACAAAAACTTGGTGCAATTCATAGGTTGGTGCCACGAGGAAGGTGAATTGCTTCTTGTTTTCGAGTTCATGCCGAACGGAAGCCTCGACACACACCTTTTCGGAAACAAGAAGACTCTGGCATGGAATCTGAGGTACAAGGCCGCGATTGGAGTCGCGACCGCGCTTCATTATCTCCATGAAGACGCAGAGCAATGCGTTCTTCACAGAGATATTAAGTCAGCGAATGTGTTGTTAGACAACGATTTTAACACGAAGCTGGGCGACTTCGGCATGGCGAAATTGGTGGATCCAAGATTGAGGACTCAGAGAACAGGGGTTGTGGGAACCTATGGGTACTTGGCTCCGGAATACATCAATGGAGGGAGGGCGAGTAAGGAGTCAGATATGTATAGCTTTGGAGTTGTGGCATTGGAGATTGCAAGTGGGAGAAGGACTTTCAGGGATGGAGAGTTTCATGTGCCAATAACAAATTGGATATGGCAACTTTATGTTGATGGGAACCTTATGAGTGGTGCTGATGAGAGGTTGTGTAAGGATTTTAATGTAAATGAAATGATGAGTTTGCTTACTGTGGGGTTATGGTGTACACACCCTGATGTTAAACAGAGGCCAAAGGCAGCACAAGTTATTAAGGTTCTTCGGCTTGAAGCTCCAATACCAGAGATTCCTAAAGATATTCGTTATAATAATGTTCTTCCACAACATTCAAACATTCTGCAACAACCACCACATTACTCCCTTGAATCGCCGCCGGACATTACTACTAGTCTTGTTTACGGTGGACGGTAA 2076 0.4533 MIATAASKISISMASLSSSHQFFNNLVPSILHLLLLITLSSLPILVHPLSFNITNFDDPASASQMAYEGDARSSNGSIDLNKVIYDFRVGRAIYGQPLHLWDSATKILTSFSTSFTFTIDAVNDTKIGDGFVFYLAPLGYQIPPNSAGGTFALFNQTTNLVNQPQNHVVAVEFDTFIGSIDPPFQHVGIDDNSLTSLATAKFDVDKNLGVKCFALISYEASTKTLALSWSFGGSSRNKTIATASTSNSNSLSYNIDLMQALPEWVNFGFSSSTGLSTERNVIYSWQFHSTLGGEMGKVQNKKLNIVVVVVPVVVTVVLLTVVVVVGLLIIKKRRRTNEEGGGEYPGQFPVEFDLDRATIPRRFDYKELVAATNGFAEDKRLGQGGSGEVYKGVLSYLGRVVAVKRIFADFENSERVFHNEVRIISRLIHKNLVQFIGWCHEEGELLLVFEFMPNGSLDTHLFGNKKTLAWNLRYKAAIGVATALHYLHEDAEQCVLHRDIKSANVLLDNDFNTKLGDFGMAKLVDPRLRTQRTGVVGTYGYLAPEYINGGRASKESDMYSFGVVALEIASGRRTFRDGEFHVPITNWIWQLYVDGNLMSGADERLCKDFNVNEMMSLLTVGLWCTHPDVKQRPKAAQVIKVLRLEAPIPEIPKDIRYNNVLPQHSNILQQPPHYSLESPPDITTSLVYGGR 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03474 691 ProSiteProfiles Protein kinase domain profile. 375 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03474 691 Gene3D Transferase(Phosphotransferase) domain 1 452 648 - -
Aip06g03474 691 Pfam Legume lectin domain 49 292 IPR001220 GO:0030246
Aip06g03474 691 SMART serkin_6 375 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03474 691 Gene3D - 47 304 - -
Aip06g03474 691 Gene3D Phosphorylase Kinase; domain 1 360 451 - -
Aip06g03474 691 Pfam Protein kinase domain 376 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03474 691 ProSitePatterns Legume lectins alpha-chain signature. 261 270 IPR000985 -
Aip06g03474 691 SUPERFAMILY Protein kinase-like (PK-like) 359 663 IPR011009 -
Aip06g03474 691 ProSitePatterns Protein kinases ATP-binding region signature. 381 404 IPR017441 GO:0005524
Aip06g03474 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Aip06g03474 691 PANTHER PUTATIVE-RELATED 34 658 - -
Aip06g03474 691 PANTHER - 34 658 - -
Aip06g03474 691 CDD lectin_legume_LecRK_Arcelin_ConA 49 291 IPR001220 GO:0030246
Aip06g03474 691 ProSitePatterns Legume lectins beta-chain signature. 169 175 IPR019825 -
Aip06g03474 691 SUPERFAMILY Concanavalin A-like lectins/glucanases 48 291 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03474 Aip-Chr6 131916339 131918619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03474 34 655 Receptor kinase-like Gene Family AT5G10530 43.849 3.27e-171 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aip06g03474 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03474 - - vun:114193012 850.506