Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03465 ATGGGAACAAATCTGAGTTTTCCCAAAACTGAAAAGTTTTCTGAAGACGGAGAAAATGACTGTCTTAGATATGGTTTGTCATCGATGCAAGGGTGGCGCGCAACAATGGAAGATGCTCATGCTGCACATCTTGATGTGGATGCGTCCACTTCATTTTTTGGTGTATATGATGGGCATGGAGGTAAGGCGGTTGCGAAGTTTTGTGCCAAGTATCTTCACCTTCAGGTGCTTAAGAGTAAAGCATACCTTGATGGAGATATAGCAGCTTCTCTTCAGAAAGCTTTTTTCAGAATGGACGAGATGATGCAGGGTCAAAGAGGTTGGAGGGAATTAGCAGCCTTGGGTGATAAGATGAACAAGTTTAATGGGATGATGGAAGGTTTGATTCGGTCTCCACGCGGCAACAATGTTAATTGCCAAAGTGATGATTGGACTTTTGAGGAGGGACCCCATTCCAATTTTGCTGGACCAACTTCTGGAAGCACTGCTTGTGTAGCAATTGTTAAAAACAACCAACTTTTTATTGCAAATGCCGGTGATTCGCGTTGTGTTTTGTCTAGGAAGGGTCAGGCATACAATTTAACAAGAGACCACAAACCTGACCTTGCGATTGAGAAGGAAAGAATCTTAAAAGCTGGTGGTTTCATTCACGCAGGACGAGTTAATGGGAGTTTAAATCTTGCAAGAGCTATAGGTGACGTGGAATTTAAGCAGAATAAATTTCTCTCAGTTGAAACACAGATTGTGACTGCAAATCCAGATATAAACATTGTTGATCTTTGTGACGAAGATGAATTTATGGTGCTCGCTTGTGATGGCATATGGGACTGCATGTCAAGTCAACAATTGGTTGATTTCGTGCGTCAAGAACTGCTGTTGGAAACAAAACTTTCTGCAGTGTGTGAGCGAGTACTAGATCGTTGTTTGGCACCGTCAATTACTATTGGCGAGGGATGCGATAACATGACCATGATCTTGGTGCAGTTCAGAAAACCTTCCCAATTCATGCCCCAACAGAAGAGCAGTACTCTTCAAATGAAGCAAAACTAG 1050 0.4248 MGTNLSFPKTEKFSEDGENDCLRYGLSSMQGWRATMEDAHAAHLDVDASTSFFGVYDGHGGKAVAKFCAKYLHLQVLKSKAYLDGDIAASLQKAFFRMDEMMQGQRGWRELAALGDKMNKFNGMMEGLIRSPRGNNVNCQSDDWTFEEGPHSNFAGPTSGSTACVAIVKNNQLFIANAGDSRCVLSRKGQAYNLTRDHKPDLAIEKERILKAGGFIHAGRVNGSLNLARAIGDVEFKQNKFLSVETQIVTANPDINIVDLCDEDEFMVLACDGIWDCMSSQQLVDFVRQELLLETKLSAVCERVLDRCLAPSITIGEGCDNMTMILVQFRKPSQFMPQQKSSTLQMKQN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03465 349 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 338 - -
Aip06g03465 349 CDD PP2Cc 23 329 IPR001932 -
Aip06g03465 349 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Aip06g03465 349 Pfam Protein phosphatase 2C 141 311 IPR001932 -
Aip06g03465 349 SMART PP2C_4 12 327 IPR001932 -
Aip06g03465 349 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Aip06g03465 349 Gene3D - 1 330 IPR036457 -
Aip06g03465 349 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Aip06g03465 349 PANTHER PROTEIN PHOSPHATASE 2C 1 338 IPR015655 GO:0004722|GO:0006470
Aip06g03465 349 SUPERFAMILY PP2C-like 4 331 IPR036457 -
Aip06g03465 349 SMART PP2C_SIG_2 28 329 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03465 Aip-Chr6 131794405 131799316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03465 1 333 PP2C-type Phosphatase Gene Family AT2G25070 74.775 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03465 K17499 - gmx:100787778 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03465 06 131794405 131799316 Aip06g03465 06 131794405 131799316 ECH
Aip06g03465 06 131794405 131799316 Aip10g02465 10 110610680 110615206 PCT