Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03451 ATGGATTCAACATGCGTTGATACTTCACTCAACCTCAATCTTTCTCCTTCTCCAACTCATATGAACCCTACTGAAGTAGTTTTGGTTGAAGAGTTACATCGTTTGAGTTGTGAGAACAAGAGGCTTACGGAAACGTTGACTCACATGTGCGTTAGCTATGAAGCTTTGCAAAAGCATTTGACCAAATTGATGAACACATCATCTGATTGTTATAATCATCATCAATCGCGGAAGAGAAAAGCTGAAAGCTATGAAAATTGTAACGATGAGGAGGAGTCATTATTACTCATCAAAAGGCCTAATAACATTGTTCATAATAATAATAATAAGGTTTCCAAGGTTCTTGTGAAGACAGATGCATCTGATTCTAGCTTGTATGTGATGGATGGATATCAATGGAGGAAATATGGTCAAAAGGTGACTAGAGACAACCCTTCTCCAAGAGCGTACTTTCGTTGCTCCTTCGCCCCAAGTTGCCCAGTGAAAAAGAAGGTGCAAAAATGCATACATGACAAGTCTATATTAGTTGCAACTTATGATGGAGAGCACAACCATGCTGCAATTCAAGATTCTTCAATGCCTTCTTCATCCACTCCCAAAGGCTCAGTGGTTAATAAAAATAACAATAATAATAGTAAAAATAATAATGATTTACCTCTTCCAATCTTAGAAAATTATAAAAAATGGTCTCATCAAACAGATTCAATAAGACTATGTTGTGATGATGTTACTATGCAAAAAAGTAACACCAAAATTGAAGAATATGCAAATTCCTTAATCAAAGATCCTGAGTTCACTGCAGCATTGGCTGAAGCAGTTGCACGCACCATCACTGGTCAGAGTAAGGAACAAGACCTAAACCTCAATTTGGGGTTCCAGCAGGGTGATGAAAACTGA 897 0.3746 MDSTCVDTSLNLNLSPSPTHMNPTEVVLVEELHRLSCENKRLTETLTHMCVSYEALQKHLTKLMNTSSDCYNHHQSRKRKAESYENCNDEEESLLLIKRPNNIVHNNNNKVSKVLVKTDASDSSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQKCIHDKSILVATYDGEHNHAAIQDSSMPSSSTPKGSVVNKNNNNNSKNNNDLPLPILENYKKWSHQTDSIRLCCDDVTMQKSNTKIEEYANSLIKDPEFTAALAEAVARTITGQSKEQDLNLNLGFQQGDEN 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03451 298 ProSiteProfiles WRKY domain profile. 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip06g03451 298 Gene3D WRKY domain 110 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip06g03451 298 MobiDBLite consensus disorder prediction 187 219 - -
Aip06g03451 298 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 284 IPR044810 GO:0003700
Aip06g03451 298 SMART WRKY_cls 127 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip06g03451 298 MobiDBLite consensus disorder prediction 188 219 - -
Aip06g03451 298 Pfam WRKY DNA -binding domain 129 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip06g03451 298 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 284 - -
Aip06g03451 298 SUPERFAMILY WRKY DNA-binding domain 126 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03451 Aip-Chr6 131552383 131584362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03451 3 273 WRKY Transcription Factor Family AT1G80840 41.042 1.79e-59 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip06g03451 WRKY 2.7e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03451 - - gmx:100127373 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03451 06 131552383 131584362 Aip10g02445 10 110186707 110188925 PCT