Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03447 ATGGAAGGAGGGCCGGAGGTAGCAAGTAAGCAAGAGTTCACGGAATTCTGGAAAAGAGCAACTAGTTTGCCCTACATCATGCACCTTACTCTATATGCTAGAATTGGAGCGGGAGCCATCATTGGTGGTGCAGTTGGTGGATGGATGAACGACAGGCTCGGCCCCTTCCCAACTGCCATTAGAGGAGCTTTCGTTTATATCAATGGTCTCCTTAACACCTTTGGCCAATTCCTCTCCTACGTTATCAATCTTGCGTTCACCAAGTCATCAACGGCGGTCGAAGTCTTGTATCCAAGGACGGCAGATGTATTTGAAGTAGCATCTGGGAGAGAATCTCAACAGCTGCATTGTGTCGTCACCGACAAACCTTGTCCCACCATCGATTGGCGACAACGAAGGCCAACGACTAAGGTGATAGGAAGACGCCGGAAGCGAGGGAGCGTGAGGAGTAATCTTTGTATCACAGCAACGATAGCCATGGAGAAGGGAAGGAGAGGAGTCGTCTTGCAGCATCTGTCGGGTTGGGTTGGAGTTGGGAATTCTGTCGGTTCGGGATCCTCGACACCAGACAACGATGGCCATGGAGAAGGGAAGGAGAGGAGTCGTCTTGCAGCATCTGTCGAGTTGGGTTGGAGTTGGGAATTCTGTCAGTTCGGGATCCTCGACACCAGGGTATGGCCGGAGATAAAGAGCTTCCACGATTTCGGCATGCCACCGGTTCTCACAAGGTGGCATGGACAATGCGAGTCCGTTCCAGATTTCGATCCTTTCCTCTGTAACAGAAAGCTCATCGGAGCCAGTATTTTATCCAAAGGATACTCATTGTCCTCCGGCGGCAATTACATGGTTAGGGAGAAGGACCAAGTGTCACCATGCAACCGTGAAGGATATGGAAGTCACCGCCGATACACCCCCCCAGCCAACCTCGTCGTCGTCACTCTCAGTCTCGCGTGGTCCTCGTCAGCGCTGTTCATCAAGTCGCGGCCTCACCTCTCGTCGTCACTCTCAGTCTCGAGTGGTCCTCATCAGCGCTGTTCATCAACTAGCTCAGAACGCTTCTGCGGCCTCACCTCTCCGTCATTCACAGTCTCTGTTCCCTCAGTCTCTGCCTCAATTCCTCTACTCCCTCAGGGAACTTTGGTGAAATGGTGGTGGTTGTTGTGTTGCTTAAAAACTGATTTAAGCAAATCCTTTGTTGTTGAAAATATTTTTGGTTTCTTTGCTAGAATTTTAAAAATGGCTTCATCTCAAACACCATCAGAAATGCCACCATCTCAAGAACAAGCATCATCAGCAACTCCTATCCCTGATCTTACCACTAAAAGAGTTTATAACAATAGAGGAAAGACTGATCCAGCTTGGGGTCATTGTAAACAAATTGTGGAAAAAACAGGGAAAATTACTATGATGTGCATATATTGTGACAAACCTGTTAGGGGAGGTGGGATTAATCGATTTAAGTATCACTTGGCTGGAAAAGGAGGAGATGTTGAGAAGTGCAAAAAGGTTCCACCTGCTGTTGCTCATCAATTTGGGCAAAGTATTGAAGAATTTATGAATAAGAAAAGGAAAACTCAAGAAAATTATGCAGAAAGTTATGGAGAATGTGATGATGTTGAAAGAGAATTTGATAGAATGGAAGAGGTTGAAGCACGACAGCAACAACTCCAACATTCAAGGACAAGGTTGCCACCACCCGCAGCTAGGAAAGGGAAAAAGACTACTGGAATAGAGACTTTTTTCCCATCTTCAacaacacctggagcccaaccaacgataaaaagtgtattgcaaaATGTTGTCAAGCTTACTGAGCCACTTGTTCGTGTGCTTCGTATTGTGGATAGTGAAGATAAAGTTGCAATGGGTTTTTTGTATCAAGCTTTTAATATGGCTAGAGAAGAGATAGTGAAGAGGTTTCGACGAAGAAAGAAGATTGTGGAGCCTTACTTGAAGATTTTGGATACTCGTTGGGATTCACAACTTAAAAAAAATCTTCATGCTGCTAGCTATTGGTTAAACCCTGCTTTTCGATTCAATGCTGCTGAATTTGAAAAACATAAGCAAACCACTTATGGCCTACTAGATGTAATTGAGAAATATTCATATGATGATTCAGAATTGAATACTAAGTTGACAAGTGAGAAGAGAATATATTCTAATGCTGAAGATGATTTTGGAAGACAATCTGCACTGCGTGAACGAAGCACAGTGATGCCAGATTCACCGCCGTTTTTAACTCCTGAAGAGGTTGATGCTCTACGAAATGAATTGGCAAATATGTCCATTCAACCAACTTTGGATGATCTAGTACGGGAGCGAAAGTACGGGATCATGAAACAGCAATGGTTGCCGCTGCACAGATATCGCAGAGCAGTGATACTTTCGAACGGACAAGCATCTCGCGTCAAAGTTGCCTTTGATGATGACGTGAAATGTAGATATGGACTGGTGGGGCATTGTGGAGGCTGCGTGATGGAGGTCAGAAATGTTATTAGGGTGGAATGA 2508 0.445 MEGGPEVASKQEFTEFWKRATSLPYIMHLTLYARIGAGAIIGGAVGGWMNDRLGPFPTAIRGAFVYINGLLNTFGQFLSYVINLAFTKSSTAVEVLYPRTADVFEVASGRESQQLHCVVTDKPCPTIDWRQRRPTTKVIGRRRKRGSVRSNLCITATIAMEKGRRGVVLQHLSGWVGVGNSVGSGSSTPDNDGHGEGKERSRLAASVELGWSWEFCQFGILDTRVWPEIKSFHDFGMPPVLTRWHGQCESVPDFDPFLCNRKLIGASILSKGYSLSSGGNYMVREKDQVSPCNREGYGSHRRYTPPANLVVVTLSLAWSSSALFIKSRPHLSSSLSVSSGPHQRCSSTSSERFCGLTSPSFTVSVPSVSASIPLLPQGTLVKWWWLLCCLKTDLSKSFVVENIFGFFARILKMASSQTPSEMPPSQEQASSATPIPDLTTKRVYNNRGKTDPAWGHCKQIVEKTGKITMMCIYCDKPVRGGGINRFKYHLAGKGGDVEKCKKVPPAVAHQFGQSIEEFMNKKRKTQENYAESYGECDDVEREFDRMEEVEARQQQLQHSRTRLPPPAARKGKKTTGIETFFPSSTTPGAQPTIKSVLQNVVKLTEPLVRVLRIVDSEDKVAMGFLYQAFNMAREEIVKRFRRRKKIVEPYLKILDTRWDSQLKKNLHAASYWLNPAFRFNAAEFEKHKQTTYGLLDVIEKYSYDDSELNTKLTSEKRIYSNAEDDFGRQSALRERSTVMPDSPPFLTPEEVDALRNELANMSIQPTLDDLVRERKYGIMKQQWLPLHRYRRAVILSNGQASRVKVAFDDDVKCRYGLVGHCGGCVMEVRNVIRVE 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03447 835 Gene3D Peptidase S8/S53 domain 219 301 IPR036852 GO:0004252|GO:0006508
Aip06g03447 835 MobiDBLite consensus disorder prediction 554 573 - -
Aip06g03447 835 ProSiteProfiles Zinc finger BED-type profile. 448 507 IPR003656 GO:0003677
Aip06g03447 835 MobiDBLite consensus disorder prediction 417 438 - -
Aip06g03447 835 PANTHER OSJNBA0013A04.12 PROTEIN 443 558 - -
Aip06g03447 835 PANTHER OSJNBA0013A04.12 PROTEIN 599 732 - -
Aip06g03447 835 PANTHER HAT TRANSPOSON SUPERFAMILY 443 558 - -
Aip06g03447 835 PANTHER HAT TRANSPOSON SUPERFAMILY 599 732 - -
Aip06g03447 835 SUPERFAMILY Ribonuclease H-like 596 700 IPR012337 -
Aip06g03447 835 MobiDBLite consensus disorder prediction 180 199 - -
Aip06g03447 835 Coils Coil 539 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03447 Aip-Chr6 131425726 131439595 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03447 208 310 Subtilisin-like Serine Gene Family AT2G05920 44.660 4.54e-21 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03447 - - aip:107647673 387.882