Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03431 ATGGCTACACCACATGATGAAAATAATGGAACAGTTTCAATTTCAAGGGTTGTGTGTGTGCATCCAAAGATTGAACAACCTCATAGGGTGTTAAGCCTCTCAAATTTGGATAGGCAGTGTCCAAGACTTATGCAATTGGTGTTCTTCTACAACAACTTGATGAAGAACGATTTGTCCCTCAATTCAGTGTTCAACAGCTTGAAAATTGGGTTGGAAGAGACCTTGATTATGTGGTACCCGGGTGCTGGAAGGTTGATGATGATGATGAACCCTAATAATAATAATAATAATAATAATAATAATCAAAGTGATGGAAAGCTCAATCTTTGGTGCAATAATGAAGGTGCAATTCTTGTGGAGGCTGAGACCAAAGCTAGAATCTCACAACTTGGGGATCTTTCTCAGTACAATGAGTTCTTCGAGAATCTTGTTTATAAGCCTGATTTTGATCCCAATTTCTCAAACATGCCTTTGATTGTTGCTCAGGTAACAAAATTTGGTTGTGGAGGGTATTCAATTGGCATTGGAACAAGCCACTCACTATTTGATGGACCAGCAACCTATGATTTCTTGTATGCATGGGCTTCAAATTCTGAAATTATGAAGGCTATTACAGCTAAGCCTCTTGAGCTTCCAAAACCAGTGCATGAGAGGGGAATACTTCTAAGTAGTGGTAATAATAATAAGCAACAACTTTCAAAAGGGTCTCTGAATTTACCTTCAAGTTCGAATTTTTATGCTCATGATGAGCATAATAATCAACCAATTAGGGCTATGGCAGTACAACATTTATATCAACTCATAATGCAAGCAACTGCAGCAGCTACACTACTTCAAAGTAGAAGTGATGAACCCTCCGAAAATAATTATCAAGAGAAGTGGGTTCTTAAGACCTATCATCTATCTGCTGCAATGATAGATAACTTGAAAAGGAAGTACTTATCTTCCATCAAGACAGGATCTCTTCCATTCTCAACCTTTGAGGTTCTTACAGCTCATCTCTGGAAGGCAAGGACAAAAGCTTTAGGGCTGAGCAAAGAGAAGGTAGTATGCCTTCAATTTGCAGTGGACACAAGGAACAAGATGGTGCCTCCATTACCAAAAGGCTTCAGTGGTAATGCTTATGTTCTTGCCTCACTTATGATGTCTGTGTCACAATTATTGGACCATTCTTCCCATGAATTGATCATTGAGAAAATAAGAGAAGCCAAAAATGCTGTGAACCATAGCTATGTCAAATCATACATTGATGCATTGGAGTTAGGCTCTAATAATTCTCTGCCTCCACTTAAGGAACTAACTCTTGTTAGTGATTGGACGAGAATGCCCTTCCATAACATTGAGTTCTTTCATGGAAGAAAAGCAGCTTATGCTTCTCCACTTGCCACTCCTGTTCCTCAGGTTGCTTATTTCATGCAGAGTCCATTTGATGTTGGTGGTGTTGACCTTAGGATCGGCTTTCAAGATGGAATAACCCTAAGTGCTTTTACCCAATGTTTCTTAACCTAA 1509 0.3903 MATPHDENNGTVSISRVVCVHPKIEQPHRVLSLSNLDRQCPRLMQLVFFYNNLMKNDLSLNSVFNSLKIGLEETLIMWYPGAGRLMMMMNPNNNNNNNNNNQSDGKLNLWCNNEGAILVEAETKARISQLGDLSQYNEFFENLVYKPDFDPNFSNMPLIVAQVTKFGCGGYSIGIGTSHSLFDGPATYDFLYAWASNSEIMKAITAKPLELPKPVHERGILLSSGNNNKQQLSKGSLNLPSSSNFYAHDEHNNQPIRAMAVQHLYQLIMQATAAATLLQSRSDEPSENNYQEKWVLKTYHLSAAMIDNLKRKYLSSIKTGSLPFSTFEVLTAHLWKARTKALGLSKEKVVCLQFAVDTRNKMVPPLPKGFSGNAYVLASLMMSVSQLLDHSSHELIIEKIREAKNAVNHSYVKSYIDALELGSNNSLPPLKELTLVSDWTRMPFHNIEFFHGRKAAYASPLATPVPQVAYFMQSPFDVGGVDLRIGFQDGITLSAFTQCFLT 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03431 502 PANTHER BRASSINOSTEROID-RELATED ACYLTRANSFERASE 1 9 502 - -
Aip06g03431 502 Gene3D - 8 232 IPR023213 -
Aip06g03431 502 Gene3D - 271 498 IPR023213 -
Aip06g03431 502 Pfam Transferase family 13 489 - -
Aip06g03431 502 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03431 Aip-Chr6 131259423 131266429 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03431 12 488 Monolignol Biosynthesis Gene Families AT5G48930 24.587 3.20e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03431 K15400 - gmx:100779295 640.573