Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03418 ATGAAGCTTCTTACAATAATGCTTCTCATGTTCTTCCTTATTCTCCACAAACCAAGTTTCGTTCTTTCTTCAACAATTGATTACCCTTTTGCTCCTTCACCTCAAATTCAAGTCATTTCTACATCAATGGCTTCTTCACCTTCATCCCCTGGTTTTGAACAAGAGAATGAAAAGCAGGGCATGGATTCACACAGGAAAATGGTGATAGCTTTTGTTGTTGCCAGCACTGCACTTAGTGCACTCATTTTATGCCTCTTATTCTTCTGGATTTATTATCATACAAGCCATTCATCAAAATCCAAAAGGACAAGTGTTCAAAACTCAGGGCAAGATGCTGAGAAAGGGGCATATTTGAGCAAATTTAGTTCTATAAAGATGGTGGGTAAGAAGGGTTGTGTTCCAATAATTGATTATAAGCAAATAGAAAAGGGCACAAATAATTTCAAGGAGAGTAATATTTTGGGGGAGGGTGGTTTTGGATGTGTTTATAAGGCTACTTTGGATGATAATTTGGATGTTGCTGTTAAAAAACTTCACTGTGAAAATCAATATGCTGAGACAGAATTTGAGAATGAGGTGGAATTGTTAAGTAAAATTCAGCATCCCAACATAATTTCTTTATTGGGTTGTAGCAATGATGGAATTACAAAGTTTATTGTCTATGAATTGATGCACAATGGATCATTGGAAACCCAATTACATGGACCTTCTCATGGCTCAGCATTGACTTGGCATATGAGGATGAAGATTGCTCTTGACACAGCAAGAGGATTAAAATATCTGCATGAGCACTGTTACCCTGCAGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGATGCAAACTTCAATGCAAAGATTTGTGATTTTGGGCTTGCCATAACTGATGGGTCCCAAAATAAGAACAACATCAAGCTTTCAGGCACATTGGGGTATGTAGCTCCAGAGTATCTTTTAGATGGTAAATTGACTGATAAAAGTGATGTGTATGCTTTTGGAGTTGTGCTTTTGGAGCTTCTATTAGGAAGAAAGCCTGTGGAGAAACTGGCACCATCACAATGCCAATCTATTGTCACATGGGCCATGCCACATCTCACAGACAGATCCATGCTTCCAACTATTGTGGACCCTGTGATTAAGGATGCAATGGATCTCAAGCACTTGTACCAGGTTGCTGCCGTGGCTGTGTTGTGTGTGCAACCGGAGCCGAGTTACCGGCCGCTGATTGCGGATGTTCTGCACTCACTTATTCCTCTTGTGCCTGTTGAGCTTGGAGGAACACTCAGAGTTTCACAAGTGACACAACAAGTTTTACCAATTGATGATGTTGCTGAGAATTCTAGTCACTCAATTTGA 1362 0.3957 MKLLTIMLLMFFLILHKPSFVLSSTIDYPFAPSPQIQVISTSMASSPSSPGFEQENEKQGMDSHRKMVIAFVVASTALSALILCLLFFWIYYHTSHSSKSKRTSVQNSGQDAEKGAYLSKFSSIKMVGKKGCVPIIDYKQIEKGTNNFKESNILGEGGFGCVYKATLDDNLDVAVKKLHCENQYAETEFENEVELLSKIQHPNIISLLGCSNDGITKFIVYELMHNGSLETQLHGPSHGSALTWHMRMKIALDTARGLKYLHEHCYPAVIHRDLKSSNILLDANFNAKICDFGLAITDGSQNKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLAPSQCQSIVTWAMPHLTDRSMLPTIVDPVIKDAMDLKHLYQVAAVAVLCVQPEPSYRPLIADVLHSLIPLVPVELGGTLRVSQVTQQVLPIDDVAENSSHSI 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03418 453 PANTHER BNAA04G14780D PROTEIN 37 440 - -
Aip06g03418 453 SUPERFAMILY Protein kinase-like (PK-like) 129 418 IPR011009 -
Aip06g03418 453 Gene3D Transferase(Phosphotransferase) domain 1 224 423 - -
Aip06g03418 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Aip06g03418 453 CDD STKc_IRAK 154 421 - -
Aip06g03418 453 Pfam Protein tyrosine and serine/threonine kinase 151 360 IPR001245 GO:0004672|GO:0006468
Aip06g03418 453 Gene3D Phosphorylase Kinase; domain 1 108 223 - -
Aip06g03418 453 ProSiteProfiles Protein kinase domain profile. 148 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03418 453 ProSitePatterns Protein kinases ATP-binding region signature. 154 177 IPR017441 GO:0005524
Aip06g03418 453 PANTHER OS01G0750732 PROTEIN 37 440 - -
Aip06g03418 453 SMART serkin_6 148 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03418 Aip-Chr6 131100928 131107494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03418 3 364 Receptor kinase-like Gene Family AT1G80640 46.448 5.69e-98 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Aip06g03418 PK_Tyr_Ser-Thr 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03418 - - gmx:100812044 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03418 06 131100928 131107494 Aip10g02411 10 108830744 108834401 PCT