Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03414 ATGCCTATGCGTCAACACTCCCGAACTGCTGAGAGGTACCTCCCACATTGTAGGTGGGCTGATCCATCCCTGTTGCCACACCACCAACATCCTCACCAACAGCGTGCTGAGCACCGTCATCCTcagcggatgATATATACTCCAATAAATCAACCTAGAAATGAAAGCAGTGGTAGGAAATGTCACGGTGTTGTTTATGATTGGATGATAACTTTGAAATTAGGTAGCTCTCAGGAAGCTGAGGACGCTGATCGAAGGGATGGTCTTCTCCTATCAACCCAAAAAACCCTAGCAGCGTCCCCCAAGAAAGCCGACGCCGGTGTCGTGACTCTCACCGTCTCTGGTGTTTGGCTTCTGAGTTTGTTCCAGCTGCTCCCTCCGGGTGAAGGACCCCCCGACGGAAGCCATTATCCAGATCAGGTGCAGGAGCCAGGGAGCGGTGGTGCTGACAAACGCCATAATAGTCAGGTGCGGTTGTCCTGTACTCAGCATTGCTGGCCGTCCTCCTCCGTCCCTCTCAGTCCAAGGACTTGTAGCACACTACAAAGAAATGGTACTTTCAAAGACACTGGAGACATAGATATTGTAATTTCAATGTTTCGCTTCGTAGCGGGAAAACAACAAGTATATCAAGGAAAGAAGGAGGTTGCCCAGTTGTTGCCAATAGATTTCGATCGTTCGTTTAACAGTGAGGGTAAAGACTCGGTCGGGAGTGCCTCCAATGATAGTCGCGGACATTATTCTGCAAGTGATGATGAATACGACGACGACGATTACCTGGAGTGCAATGAAGGCCGCGAAAGCGGAGAGAAAATGGTAGGTGGTGCCGATGATGGTAATGGGTGGGGTGATGCGAATGATGCGGCAGAGGTTGGTCTCCGCCGGCCAGTAGTTGCTACGGACTTTTTGGGAAAAGAGTTTGCAACGGAGGATGATGCTTATGCTGCCTACAAGGAATTCGCTAAGTCAAGGGGTTTCGGAGTTCGGAAGGGAGACATAGCTCGTGTGAATGGGGTGTTGATTAGGAGAGACTTTTTTTGCCATCGACAAGGCACAAGACATGCTAAGCACTACGACCGTCCTGAGCGAGTAAGGGAGGAGAGGCTGGAGAGTCGCACGGACTGTAAGGCAAAGTTGAAGATTTACTATGATATGCAGCATAGTGTGTGGAGGGTCAGGACCATCGTGGACGAACACAACCACGAGCTTGCCCCGGCAGTGTTCGCACGTCTCATTCGTAGTCATCGGAAGATGAGTGACGGTGACAAGGCGCAGGTGGATAGTTTGAAGCAGTTTGGGATCGCCACGTCGAAAATAATGGCTTACATGGCGGGGCAATCTGGTGGGTATGGCATGCTCAGATTCACAAAACGGGATCTCTATAATTATGTTCATGGGCAAAGGGTTGCACGAATATGCGACGGCGACGCCGCCGCGACTATCAGCTACTTGGAGGGTAAGGCAAATGCTGACATGAGGACCGTGGCCCGTTACACACGGACCTCGGACAATCGTTTAGGAAGCCTAATTTGGGCCGACGGTGAGATGATCACGGATTATCATCTATTTGGTGACGTGTTGGCCTTTGATTCGACGTACCGATCTAACAAGTACAAGAAACCACTGGTGGTTTTTTCTGGGTCAAATCACCACAAACAGACATCAATATTTGGATTCGTATTGCTGAAGGATGAAGAGGTCCGCACCTATAGGTGGGTCTTGCTGAACCTGCTCGATGTTATGGGGCAAAAAAATCCTTGTGTAGTGGTGACCGACGGGGACAAGGCGATGCGCACTGCAATTGCGGAGGTGATGCCGACGGCGACACATAGACTATGTGGTTGGCACTTGGAGAAGAATTGCGTCCAGAGGGTGAAAGATCCTGAATTTCGCAAGGTGTTTAGGAAAGCAATTTATGCTAACTTTGAAATCAGCGAGTTTGAGGAGTACTGGAAGGCATCTGTCGAGTCACTTGGCCTAGAGGACAACAGTTGGGTTAAGTCCACGTATGAATCTAGTGAAAGTTGGGCAATGGCGTACCTTAGGGGAACATTTTGCGCAGGATACAGGACGACCTCAAGATGTGAAGGGATAAATGCTTTTGTTAAGGGCTTCCTTAAATCAACTGATAGCATTCTGGAGCTTGTGCATAGTTTGGATCGTGTTGTAAAGGACTATCGGAATAATGAAGTAATTGCCCAATTCCACTCCACCTACTATAGTTCGGTGCTGACCACCGGCCTTGATTCGATCGAGCGGTTTGCATCGAAGGTGTATACAAGAGCAGTATTCAGAGAAGTGAAGAAACAAATTAAGGCTGTGGCAACGCTATTGTTTCGGGCCAAGGACAGCATCAGCACAACAACTGTGTACACATTCTCGCGAATGGGAAAACCTAATAGAACACACAAGGTATTGGTTGACCCGAACGAGGGAAAAATAGAGTGTGAGTGTTCGATGTGGAACAGTGAAGGGATTCCCTGCAGTCATATCTTTTGTGCGATGAAGTACGAGGGTTTCGAAGAAATACCACCCGGTCTTGTTTTGAGAAGATGGAGCAAGGATGCAAAGGATTGTAGATTGACCGCTGCGGATAGTAAAGATGGTTCTGAAGGCCGTTTGCTTCGATATGGTGCTCTATGTGGGGCAATGAGTTTAGTTGCACAGCTTGGGTCGGAAGATGCTGCAGAGTTTGTTGTGGCTAGGGATGGAATTGCTAGTCTCACCAAAACGCTTCAGCAGAGATTCGTTGACAAGGTTGGCAGCAAACTTGGTCTATCGCCGGTGTCAGGAATCGAAGACCCCGTCGTATCGAAGACAAAAGGGGCACCGAGGAAGGGAAAGGAGTGTGTACCGATTAGCCAGGGAGAGAGGACGCCGAAGAGACGACGTTGTACCAACTGTGGGGAAGCCAGTCACACCAAGAGGACTTGCACGTGGCATCCGGGAGAGGGGGTTGCAGGCAATGATGATGCAGGCGGTCCAAGTTACATGGAGCATGATTCGCAAGATGCTGCTGCCCCTTGCGCAACACCAGAGGCACGTCATTGTCACACAAACGAGGTGGGAATGCAATCGGAGAGCGGCAACCATGGTGACACTGTCCCGGCGCACGCAGATGGGACGAATCCATGTATCGGTGTTGGAGGTGGGGGCCCTAACTTCTTCCTTGGCGGGCAACACATCGAGCAATTTTATTCCGCTAACAGTTGCTCGGGGCACACTGGTCAGCAGTCTTCACAGGCTCCCTGCCCGAGGTTAAGGAACCCCAGTGCGTGGACCAATGAGGAGTGGTTTGAGCGGTGGATGACACAGAATGTCGTCAGTAGAATGGCTGGCAGCGGAATGTCTGGACGTGTCCCCAAGCAATGA 3372 0.5006 MPMRQHSRTAERYLPHCRWADPSLLPHHQHPHQQRAEHRHPQRMIYTPINQPRNESSGRKCHGVVYDWMITLKLGSSQEAEDADRRDGLLLSTQKTLAASPKKADAGVVTLTVSGVWLLSLFQLLPPGEGPPDGSHYPDQVQEPGSGGADKRHNSQVRLSCTQHCWPSSSVPLSPRTCSTLQRNGTFKDTGDIDIVISMFRFVAGKQQVYQGKKEVAQLLPIDFDRSFNSEGKDSVGSASNDSRGHYSASDDEYDDDDYLECNEGRESGEKMVGGADDGNGWGDANDAAEVGLRRPVVATDFLGKEFATEDDAYAAYKEFAKSRGFGVRKGDIARVNGVLIRRDFFCHRQGTRHAKHYDRPERVREERLESRTDCKAKLKIYYDMQHSVWRVRTIVDEHNHELAPAVFARLIRSHRKMSDGDKAQVDSLKQFGIATSKIMAYMAGQSGGYGMLRFTKRDLYNYVHGQRVARICDGDAAATISYLEGKANADMRTVARYTRTSDNRLGSLIWADGEMITDYHLFGDVLAFDSTYRSNKYKKPLVVFSGSNHHKQTSIFGFVLLKDEEVRTYRWVLLNLLDVMGQKNPCVVVTDGDKAMRTAIAEVMPTATHRLCGWHLEKNCVQRVKDPEFRKVFRKAIYANFEISEFEEYWKASVESLGLEDNSWVKSTYESSESWAMAYLRGTFCAGYRTTSRCEGINAFVKGFLKSTDSILELVHSLDRVVKDYRNNEVIAQFHSTYYSSVLTTGLDSIERFASKVYTRAVFREVKKQIKAVATLLFRAKDSISTTTVYTFSRMGKPNRTHKVLVDPNEGKIECECSMWNSEGIPCSHIFCAMKYEGFEEIPPGLVLRRWSKDAKDCRLTAADSKDGSEGRLLRYGALCGAMSLVAQLGSEDAAEFVVARDGIASLTKTLQQRFVDKVGSKLGLSPVSGIEDPVVSKTKGAPRKGKECVPISQGERTPKRRRCTNCGEASHTKRTCTWHPGEGVAGNDDAGGPSYMEHDSQDAAAPCATPEARHCHTNEVGMQSESGNHGDTVPAHADGTNPCIGVGGGGPNFFLGGQHIEQFYSANSCSGHTGQQSSQAPCPRLRNPSAWTNEEWFERWMTQNVVSRMAGSGMSGRVPKQ 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03414 1123 MobiDBLite consensus disorder prediction 939 955 - -
Aip06g03414 1123 MobiDBLite consensus disorder prediction 129 154 - -
Aip06g03414 1123 SMART 26again6 814 841 IPR006564 GO:0008270
Aip06g03414 1123 Pfam FAR1 DNA-binding domain 317 404 IPR004330 -
Aip06g03414 1123 MobiDBLite consensus disorder prediction 230 262 - -
Aip06g03414 1123 PANTHER OS02G0262500 PROTEIN 301 859 - -
Aip06g03414 1123 Pfam MULE transposase domain 526 620 IPR018289 -
Aip06g03414 1123 ProSiteProfiles Zinc finger SWIM-type profile. 803 839 IPR007527 GO:0008270
Aip06g03414 1123 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 301 859 IPR031052 GO:0006355
Aip06g03414 1123 MobiDBLite consensus disorder prediction 935 955 - -
Aip06g03414 1123 MobiDBLite consensus disorder prediction 231 245 - -
Aip06g03414 1123 Pfam SWIM zinc finger 804 831 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03414 Aip-Chr6 131007639 131017494 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g03414 MULE 8.3e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03414 - - aip:107607194 1284.24