Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03407 ATGCAAGACTCTGTTTACCCCAGCTGCAGTTATTCAGCTGACCATGGTGATGCTGGAAACTCATTTGTGGCTCTCCTTTATGGCCCTCCATCCCTGTTGCAGTATGATTTCAAAGAGTTGTCTGATCAGAAACTTTGTACCCCATCTGGTAGTTGTACTGCTGCAAGTGGGAACTTTGTTGTTGATTGTAGTGATAGTGGAACCTTCCCAACATCTAGTGGTGGAATCTTTATTGAAAATTTAAATAGTCATAACCTGCGAAGCAGGCAAGATACGGTTCTTGATAGTTCTTCCAGGGCAATGGTTGGTCTGAGGGATAGTGTTCATTCTGTATTTCATGATATTCAGAGTAATAATACTGCTGCACAGTCCACAGTCCCTGGTGGCAAAAAGGCAAGGGAACCTTTTTCTTCTAGGAGCCAATGGTGTAGTACAAACCCTGCATCCAGTCTAAATGTTTGTGCTACAGATAATCAAACTACGCCAAATATGGTTCCAGAACAATGCTCTTCCAACCTTAATTCTCTTTTAATGAGTGGATGCCCTCGTGTGTTCTGCATGGAAAAAAGTGGATATCTTCTTCTCAGCAATACAGGGCTTCTTGGTATTGTTTGCTTATGCCACTCTTGCCACATGTCAGTTCTTAAGTTTTGTGAGCATGCAGGGTTATATGGCATCAACCCAGGGGATGCTGTTCATATGGAAAATGGTGAGACCATTGCACAATGGAAGAATTTATACCTATTAGAGTTTGGGATTAGGTCTCTGGGCAATGAGAGTGAATGGGACTGGCCAGAAGTATTATCAACAACAGGAAGTCTGATGAGATCCAATTCATCTTCATCCAGTATGTCAAAGAGTGATTTATCTCAAATATTGAGTTCATCTGCAGTCAGATTAAGGTCTGCAAAGCCTTGTGATTATGTTCCATTTCCAAAGGCCACCAGCACAGACCCCAGTTTACTTAGTGGTGTATTTCCCAAAGAACAACCAAATACAATCCAGGAAAGTGGCAAAATTCCGCTCAAAGGTTTTGTTGGAACATGTACAACAACAAACATTGTTGGAATTCAAGGGGATGATGGTTGTCAACCTGTACCACCTTTCCTTGATTCCCTTAAACAAAATGACAATTTTTCAGTTGCCCACTCTCCTTCACAAATTCCAACAAGCCTTCCAATAGATCATGAATGCATAAAAAACAATAATGAAAAAGATGTGCTTATAGGCAAAGATGCAGCATCGTCTAATATTGAGCTGAGGCTTGGACAACCACCTCAGAAAGGAAATCCAGTTCCATCATTTATAGGACATCCATTGTTTAATGCCCTTGTCAGCCCTCCAAATTTGCATCTTGCAAAGCCAATGATTAATATGCATAGCAGTGAGGGGAAATTGCAGAATAATTTTTGCCATGGTTATGGTTCCTTCAAAATGGTTGATCAACCTCAGCCTAAAATCAAGAACTATATGCCTGGTGTTAGCAATGCTTTTGGTGGTGCAGCTAGATCAAAACCTGACAGTGCAGCCAACAGTTTGTTGTTTTCACCACTTCCACAGTTAAATCTTCAGCCAGAGGGAAAGACAAAAGCTAGTGAAATTTTGATGAATGATAGTGGACCTGACATATCCAAGAAACATTATGAATTTAATGGCATGCAGTTTGCTCCTATTAATGTTCCCTGGAAAAATAATGGTCACACGGGAAGGCAATTGGATTGTTCAGCAGTGGGATCTATTAAAGGTTTGGACAATGATAAAGGTGTTAACTTTGCTAAAGATCCTTGTGCTAAATTAAACTCTGGATTTGGAATTAGTAATCTAGTGAAATATCCAAGTTCCATCAGAGGAGCTGTTGGTGGCAATGGTAGTTGTGTTTCAACTGTTAAAGGAAAGATATACGAGTCATATAATGAATCAAGGTTGCCGTTCAATACATCTGGTGGTGTAAATTTTCTCTGTGATTCTAAAAATGTGTCTTCTGTTGGACAAAAGAATCATTTCACCTCAGGGACGACAATTCCATTAGAAGGAATTCTGAAGGGCTTTCCCTTTCTTGTACCAAATTCTACATCAAATCAGACTACTACTTCACCACAGCAACAGGGCATTAACTTGGACAGACCTTTGCTTGATGAAAATATGAGGTTGCTTGCAGTGACACAGATACTGGAGTTATCTAAGCAACGACATGCATTGCATTTTCATAAAATGAATCAAAAGCACAAGAGATCCAGCAACACTTCAGAAGTTCAGCCCGACGTATATGAGGCTTTGACATCTGAACAGTTCTCTTTTGGCGCTACATTTAAATTGCCACAAAAAAGAGGTCCTTGTGGGAGTCCTGATACCATTGATGATTTAGAGAAGCTGGCTTCACTCACAGGTTTGAATAGATACTGTTTCTCTGGCTTGACACAATTACCTTTACATTCTAAAGAAAAGAAATCGCAATGTAAACAGGCCTACAATCTTCAAAATGAAGGCCAATCGTTGAGCCTTGGAATAAACAATGACAATACACTGTTTCAGAGATCAAGTGCATCCAACAATTTCACTGAGAAACCAGTGGATACGAATTTGGGAAGATACACTTTTGCTGCAGGGCAAAACCGTTCTAGAACCAATTTTTTTTTGGGAAATGGATCAACTTATAATTTTAAACAATTTGCAAAATCTAGTGGTGAAACTCCTTTGAAGATAATTTCAAAGGATGAAAGTACTCATCAATGGAGAGGTGTACCAAGTAAGCTATGGAAAGCAGATTGTGATGCAAAATCTTTAGATCCAATAGCAGCGGAAGGACAAGATGATGTTCAAAGTGTAAATACTTCTGCTAAACGCTTCAAAAGGAATTTTAATATGGAAGACCTGTTGAAAGTGCAAGAAAAGTCTAATGTCTCGACCGGGTCTTGTGCACCTATGGTCACTCAAGCTTCCATGGAGTTCAATAAGATTGATTCTTGCATTATTGATGGTGGGGACGCTACTGATTCCAACAATCTTGTACTTGATGAGGGCTCAGTAATCAATAAAGGTTGGTCACCTGATGCAGTTGAAAGTGAAAGAAGTTCTGAGTTTCTAGGCTCCACATGTGAGAGTTACTTGAACAAAGGTCATTTGAGAGTCATAAATGATCAAGATAAACCATGTCGTAGTCTCCTTGATGAGCTTAAGCTGTTAGATTCTATGACAAGGAAAAAAAGCCAGGACCAAAGTCATATACTTTCTGGTCATTTTAAAGCCAATCAATCTCAAAATGTCAAGGACTTAAAAGGAAAAAAGAAAAGGAGAAATAGGCTGAAGAATTTAGATGCCTCATTGCCTTCACCTTTCTTATTGCATAACAAGAACGATGAAAGGCAAATGTACTTTCCATCAACCCAGCGAAAATCATCTGCTAATGCCAAGCATAAACACACTGCTTTGTCACCCAAATTTCCAGGTAACCATTTTCTGAGTGCACGTCATAGTGACAAAGAAGATAGTTATGTGTCGGAATCAAGTTCAGATGACGAGTTTCGTAGCTTACATGACGTTCCTAGAAGAAAGAAACAAAGAGCAGATTTCCCTTCTGATTGTGTTGGGCATTTTCAAATGCAAGATCCAGATTTGGAGGAAACTGAAATTGGCAAGGTTGAGTCAATGTTTACCAGGGGGACAAATGCCAATAGAATCACAAGGCCAATAGTATGTGGAGAATATGGTGAAATATGCAGTGAACAATTGGCTGGAGAATTGCCAAAAATTCCAAAATTTGTTTCTCTCAGTAAGGTTCTTAAAAGTGCCAAAAGATGTAAGGTACCTAGATTAACTTCGAAAAAGAAATTGAAGAGATTGAGCTTTGGAAGTAATGAACACTGCTGTGGTCAACCCGGTTTGGAGAGGGGCAACACGTCACTTGTTATTTTCAAAGGAAAGAGAGAATCCAAAGCTATACATGGTAATAGTATTGTAAACATAGCTCCATTGAAGCTGAAGAACAAGGAAATTAGGAAAGTACGCAGTATTAATGAACTGACTGCTAAAGAAACCAAAGTGAAGGATATTGTGGTGGAGTATGGTGAAGATAAGGAGCATGGTTGGTGTAACACCAAAAGCAGAAACTTTGTTCAAGAATGCATGGGAATCTCCATCCAAAATTCAGACGCATTCTGCTCTGTGTGCCAAAACTCAAGCAATGATGACATTAACTGTTTGTTGGAGTGTAGTCGCTGTCTAATTAGAGTTCATCAGGCTTGCTATGGAATCTCCACATTACCTAAAAAAGGCCGTTGGTGTTGTAGACCATGCCGAACAAACTCAAAAGATATTGCTTGTGTCCTGTGTGGTTATGGAGGTGGAGCCATGACTCGAGCAACACAGAATCGCACAATGGTGAAAAGCCTCTTAAAAGCGTGGAGTATTGAAAAAGGTGGCATGTCTAAGCATAGTACTACACCTGAACTTTTTGAGAAGGAAACAGATGTATTTGATTCCACAAAATCTGAACTAAAATTTGACCAAACATGTGGTTTGAAGTCTGGGAATGTTGAGATCTCAAGATCAGACCAGTTGAAAGTTGAGATGTCAACAAATCAAATGCAAAATGTTCCTTACAATATTTTAAAGGTTCATAACAGCATTACAGCAGGAGTTCATGATACATCTGTAAAGCAGTGGATTCATATGGTTTGTGGGCTTTGGACTCCTGGAACAAGATGCCCGAATGTTAATACAATGAGTGCTTTTGATGTATCTGGTGTTGCAGTTCCCAGAGAAGATGTGGTTTGTTCCATCTGCAACCGCTGGGGTGGTTCTTGTATAGAGTGCAGGATTGTCAATTGTTTGGTCAAGTTTCATCCTTGGTGTGCTCATCAAAAGAACCTGTTGCAATGTGAGACTGAAGGCGATGATGACGAGAACGTTGGATTTTATGGAAGATGTATGCTTCATGCTGTTGACCCTAGATATCAGTCCAAGTATGATCCTGTTGATGATATAGATAGCTTAGAAGAAAGGGAATTCACCTGTGCCAGGACAGAGGGTTACAAGGGCTGTAAACGGGATGGTTTCCATAGATATTGTTACAGTGCCTTAAAGGGAAAGGGAGGAAGTGGATGCCTTGTTCCTGAAGAACAGTTAAATGCTTGGATTCACATTAATGGGCAGAAATCGTGTCCACAAAGACTCCCTAAACACGCATCAGATATTGAGCATGATTGTCGGAAGGAATATGCTCGGTACAAGCTAGCAAAGGGCTGGAAACACCTTGTTGTTTACAAATCTGGAATTCATGCCCTTGGTCTTTACACTTCTCGATTCATTTCCCGTGGTGAAATGGTTGTTGAGTATGTTGGCGAAATTGTGGGGTCACGGGTAGCTGATAAGAGAGAGATTGAATATCAATCTGAAAGAAAACTTCAGTACAAGGGTGCTTGCTACTTCTTCAGGATTGACAAAGAACATATTATTGATGCCACAAAGAAAGGGGGCATAGCCCGTTTTGTTAATCACTCGTGCTTGCCGAATTGCGTGGCGAAAGTGGTTACTATAAGGCATGAGAAGAAGGTTGTCTTTTTTGCAGAGAGGGACATATATCCTGGTGAAGAAATAACATATGATTACCACTTTAACAACGAAGATGAAGGAAAGAAGATTCCATGTTATTGCAATTCCAAAAATTGCAGGCGCTATCTTAACTGA 5685 0.3989 MQDSVYPSCSYSADHGDAGNSFVALLYGPPSLLQYDFKELSDQKLCTPSGSCTAASGNFVVDCSDSGTFPTSSGGIFIENLNSHNLRSRQDTVLDSSSRAMVGLRDSVHSVFHDIQSNNTAAQSTVPGGKKAREPFSSRSQWCSTNPASSLNVCATDNQTTPNMVPEQCSSNLNSLLMSGCPRVFCMEKSGYLLLSNTGLLGIVCLCHSCHMSVLKFCEHAGLYGINPGDAVHMENGETIAQWKNLYLLEFGIRSLGNESEWDWPEVLSTTGSLMRSNSSSSSMSKSDLSQILSSSAVRLRSAKPCDYVPFPKATSTDPSLLSGVFPKEQPNTIQESGKIPLKGFVGTCTTTNIVGIQGDDGCQPVPPFLDSLKQNDNFSVAHSPSQIPTSLPIDHECIKNNNEKDVLIGKDAASSNIELRLGQPPQKGNPVPSFIGHPLFNALVSPPNLHLAKPMINMHSSEGKLQNNFCHGYGSFKMVDQPQPKIKNYMPGVSNAFGGAARSKPDSAANSLLFSPLPQLNLQPEGKTKASEILMNDSGPDISKKHYEFNGMQFAPINVPWKNNGHTGRQLDCSAVGSIKGLDNDKGVNFAKDPCAKLNSGFGISNLVKYPSSIRGAVGGNGSCVSTVKGKIYESYNESRLPFNTSGGVNFLCDSKNVSSVGQKNHFTSGTTIPLEGILKGFPFLVPNSTSNQTTTSPQQQGINLDRPLLDENMRLLAVTQILELSKQRHALHFHKMNQKHKRSSNTSEVQPDVYEALTSEQFSFGATFKLPQKRGPCGSPDTIDDLEKLASLTGLNRYCFSGLTQLPLHSKEKKSQCKQAYNLQNEGQSLSLGINNDNTLFQRSSASNNFTEKPVDTNLGRYTFAAGQNRSRTNFFLGNGSTYNFKQFAKSSGETPLKIISKDESTHQWRGVPSKLWKADCDAKSLDPIAAEGQDDVQSVNTSAKRFKRNFNMEDLLKVQEKSNVSTGSCAPMVTQASMEFNKIDSCIIDGGDATDSNNLVLDEGSVINKGWSPDAVESERSSEFLGSTCESYLNKGHLRVINDQDKPCRSLLDELKLLDSMTRKKSQDQSHILSGHFKANQSQNVKDLKGKKKRRNRLKNLDASLPSPFLLHNKNDERQMYFPSTQRKSSANAKHKHTALSPKFPGNHFLSARHSDKEDSYVSESSSDDEFRSLHDVPRRKKQRADFPSDCVGHFQMQDPDLEETEIGKVESMFTRGTNANRITRPIVCGEYGEICSEQLAGELPKIPKFVSLSKVLKSAKRCKVPRLTSKKKLKRLSFGSNEHCCGQPGLERGNTSLVIFKGKRESKAIHGNSIVNIAPLKLKNKEIRKVRSINELTAKETKVKDIVVEYGEDKEHGWCNTKSRNFVQECMGISIQNSDAFCSVCQNSSNDDINCLLECSRCLIRVHQACYGISTLPKKGRWCCRPCRTNSKDIACVLCGYGGGAMTRATQNRTMVKSLLKAWSIEKGGMSKHSTTPELFEKETDVFDSTKSELKFDQTCGLKSGNVEISRSDQLKVEMSTNQMQNVPYNILKVHNSITAGVHDTSVKQWIHMVCGLWTPGTRCPNVNTMSAFDVSGVAVPREDVVCSICNRWGGSCIECRIVNCLVKFHPWCAHQKNLLQCETEGDDDENVGFYGRCMLHAVDPRYQSKYDPVDDIDSLEEREFTCARTEGYKGCKRDGFHRYCYSALKGKGGSGCLVPEEQLNAWIHINGQKSCPQRLPKHASDIEHDCRKEYARYKLAKGWKHLVVYKSGIHALGLYTSRFISRGEMVVEYVGEIVGSRVADKREIEYQSERKLQYKGACYFFRIDKEHIIDATKKGGIARFVNHSCLPNCVAKVVTIRHEKKVVFFAERDIYPGEEITYDYHFNNEDEGKKIPCYCNSKNCRRYLN 1894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03407 1894 Pfam SET domain 1762 1869 IPR001214 GO:0005515
Aip06g03407 1894 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 9 1894 - -
Aip06g03407 1894 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE TRITHORAX 9 1894 - -
Aip06g03407 1894 Pfam PHD-zinc-finger like domain 1547 1630 - -
Aip06g03407 1894 SMART PHD_3 1385 1432 IPR001965 -
Aip06g03407 1894 SMART PHD_3 1590 1646 IPR001965 -
Aip06g03407 1894 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1371 1445 IPR013083 -
Aip06g03407 1894 SMART PostSET_3 1878 1894 IPR003616 -
Aip06g03407 1894 SUPERFAMILY FYVE/PHD zinc finger 1381 1436 IPR011011 -
Aip06g03407 1894 ProSiteProfiles SET domain profile. 1749 1870 IPR001214 GO:0005515
Aip06g03407 1894 Gene3D SET domain 1647 1894 IPR046341 -
Aip06g03407 1894 ProSiteProfiles Zinc finger PHD-type profile. 1383 1434 IPR019787 -
Aip06g03407 1894 CDD ePHD 1548 1633 - -
Aip06g03407 1894 SUPERFAMILY SET domain 1748 1894 IPR046341 -
Aip06g03407 1894 CDD SET_SETD1-like 1751 1890 - -
Aip06g03407 1894 ProSiteProfiles Post-SET domain profile. 1878 1894 IPR003616 -
Aip06g03407 1894 MobiDBLite consensus disorder prediction 1069 1185 - -
Aip06g03407 1894 Pfam Tify domain binding domain 200 245 IPR032308 -
Aip06g03407 1894 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1536 1646 IPR013083 -
Aip06g03407 1894 ProSiteProfiles Extended PHD (ePHD) domain profile. 1532 1646 IPR034732 -
Aip06g03407 1894 SMART set_7 1749 1876 IPR001214 GO:0005515
Aip06g03407 1894 MobiDBLite consensus disorder prediction 1153 1185 - -
Aip06g03407 1894 Pfam PHD-finger 1398 1432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03407 Aip-Chr6 130923026 130937417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03407 1751 1894 C2H2 Transcription Factor Family AT2G23740 33.939 1.35e-15 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aip06g03407 SET 1.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03407 - - ahf:112697527 3723.71