Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03399 ATGAAATCCTTAGTAAGTAGTGCTGATGATGCTGTTAGGAATCTTCACATTGTATACATGAGATCACTCCCAAAGCATAATTATTCTCCAATATCTCACCATCTTAGTATGCTGCAACAAATTACTAATGATAACGATGCAACAAATCACATGGTTAGAAGTTATTATAAGAGCTTTAATGGTTTTGCTGCAATGATCACTAACCAAGAAAGAGAGAAGCTGAAAAAGATGGAAGGAGTGGTTTCTGTTTTTCCAAGCGAATCACTCAAACCACAAACTACAAGGTCTTGGGACTTCATGGGGTTCAAAGAATCGATACAGAGAAACAAAACTGCTGAGAGTGATGTTATAATCGGAGTTATAGACACCGGAATCTGGCCGGAGTCAGAGAGCTTCAATGATCGTGGTTTCGGTCCAATTCCCAAAAAGTGGAAAGGCGCATGCAAAGGTGGTGAAAACTTCAGATGCAACAATAAAATAATCGGTGCAAGATACTATCTAAAAGATCAAACTTCAGCAAGAGACTTTGTTGGGCATGGAACTCACACAGCATCAATTGCAGCAGGGAATAAAGTTGTGGGAGCAAGCTTCAATGGAATCGCCGAAGGAGTTGCAAGAGGAGGTGTCCCATCAGCAAGAATTGCTGCTTATAGTGTGTGTAGTGAACGAGATCAGTGCAGAGCTGATGCCATATTGGCTGCTTTTGATGATGCCATTGCCGATGGTGTGGATCTTATCACAATTTCACTTGGGCTCCAGGAGCAAATAACCTTTGATAATGACATCATAGCAATTGGATCTTTTCAAGCAATGAAAAAAGGGATCCTCACCATAAACTCTGCAGGTAACGATGGTCCTAACAATACAACATCTAGTGTATCACCTTGGTTGTTCACTGTTGCAGCTACCACTATGGATAGTAGAAACACTGATAACGTTTTGCTTGGCAATGGATTAATGCCTTCGGGGAAGTCAATAAATGGGTATGCATCAAATAGTGCTGAAATACTGAGTAGCACAGGCTTCATAAACAATAGTGCTCCAATTGTTGCTGAATTCTCTTCTGGAGGACCCAATATGCAAATCAGAGAAATTATGAAGCCAGACATTAGTGCTCCTGGTTTAGAAATTTTGGCTGCTTACTCACCTCTTGCACCACCTTCTCATGACAAAAGAGAGAAAAGATCAGTGAAATACAACATACTCTCTGGAACCTCAATGTCGTGCCCCCATGTTGCTGGTGCAGCTGCATATGTTAAGACTTCTCATCCTGATTGGTCTCCGGCAGCTATAAAGTCTTCTCTTATGACCACTGCAAAACCAATGAATGGAAGTGAACTCGCAGAATTCTCCTATGGATCAGGGTTTTTGGACCCAGTTAGGGCCATAAATCCTGGTCTAGTTTTTGATGTTTCCAAAAAGGACTATGTGAAGTTGCTTTGCAGAATTGGGTATAATACAATGGAAGTTCGAAAAATCTCAGGAGACAAAAGTGTTTGCCCTTCATCATCGTTTCATCATCGTCTGCCCATGGCAAAAGATTTTAATTATCCTGCAATTGCGGCTGAGATTGAACCAAGGAAACCATTTAAGATTAATTTCACAAGAACAGTTACAAATGTTGGATTCGCTAACTCTGCCTATAAGGCTTACATCCAACAACATTCTGGCATCAACATCACTATTGTGCCTAACGTACTCGAGTTTAAATCTCTCAAGGAGAAACAATCTTTTGTTGTTCATGTTGATGGAGGGAAATTTAGTGACAAAAGTGTAGTTTCATCATCACTATTGTGGAGCGATGGAACACATAGTGTAAGACAACAATTACAAGGCCATGAAATTCCTCAAAATGTTTTCAGTTGGAGAAATAATACTATTCTTCCCCATAAGAAGCTTTTCAGTTAG 1908 0.402 MKSLVSSADDAVRNLHIVYMRSLPKHNYSPISHHLSMLQQITNDNDATNHMVRSYYKSFNGFAAMITNQEREKLKKMEGVVSVFPSESLKPQTTRSWDFMGFKESIQRNKTAESDVIIGVIDTGIWPESESFNDRGFGPIPKKWKGACKGGENFRCNNKIIGARYYLKDQTSARDFVGHGTHTASIAAGNKVVGASFNGIAEGVARGGVPSARIAAYSVCSERDQCRADAILAAFDDAIADGVDLITISLGLQEQITFDNDIIAIGSFQAMKKGILTINSAGNDGPNNTTSSVSPWLFTVAATTMDSRNTDNVLLGNGLMPSGKSINGYASNSAEILSSTGFINNSAPIVAEFSSGGPNMQIREIMKPDISAPGLEILAAYSPLAPPSHDKREKRSVKYNILSGTSMSCPHVAGAAAYVKTSHPDWSPAAIKSSLMTTAKPMNGSELAEFSYGSGFLDPVRAINPGLVFDVSKKDYVKLLCRIGYNTMEVRKISGDKSVCPSSSFHHRLPMAKDFNYPAIAAEIEPRKPFKINFTRTVTNVGFANSAYKAYIQQHSGINITIVPNVLEFKSLKEKQSFVVHVDGGKFSDKSVVSSSLLWSDGTHSVRQQLQGHEIPQNVFSWRNNTILPHKKLFS 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03399 635 Gene3D - 480 612 - -
Aip06g03399 635 ProSiteProfiles Serine proteases, subtilase domain profile. 96 463 - -
Aip06g03399 635 Gene3D Peptidase S8/S53 domain 93 479 IPR036852 GO:0004252|GO:0006508
Aip06g03399 635 Pfam Fibronectin type-III domain 514 608 IPR041469 -
Aip06g03399 635 ProSitePatterns Serine proteases, subtilase family, serine active site. 404 414 IPR023828 -
Aip06g03399 635 CDD Peptidases_S8_3 89 439 IPR034197 -
Aip06g03399 635 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 91 IPR037045 -
Aip06g03399 635 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 15 329 IPR045051 -
Aip06g03399 635 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 332 608 IPR045051 -
Aip06g03399 635 SUPERFAMILY Subtilisin-like 95 464 IPR036852 GO:0004252|GO:0006508
Aip06g03399 635 Pfam Peptidase inhibitor I9 16 90 IPR010259 -
Aip06g03399 635 Pfam Subtilase family 114 455 IPR000209 GO:0006508|GO:0008236
Aip06g03399 635 PRINTS Subtilisin serine protease family (S8) signature 113 132 IPR015500 -
Aip06g03399 635 PRINTS Subtilisin serine protease family (S8) signature 403 419 IPR015500 -
Aip06g03399 635 PRINTS Subtilisin serine protease family (S8) signature 175 188 IPR015500 -
Aip06g03399 635 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 15 329 - -
Aip06g03399 635 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 332 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03399 Aip-Chr6 130858888 130862541 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03399 8 606 Subtilisin-like Serine Gene Family AT4G21640 35.825 1.84e-129 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03399 - - ahf:112755745 1098.57