Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03396 ATGGTTAAAAGTTATCATAAGAGCTTTAATGGTTTTGCTGCAATGATCACCAACCAAGAAAGAGAAAAGCTCAAAAACATGGAAGGAGTGGTTTCTGTTTTCCCAAGCAAATCACTCAAACTTCACACTACAAGGTCTTGGGACTTCATGGGGTTCAAAGAATCGATACAGAGAAACAAAACCGGTGAGAGTGATGTTATAATCGGAGTTATAGACACCGGAATCTGGCCGGAGTCAGAGAGCTTCAACGATCATGGTTTCGGTCCAATTCCCAAAAAGTGGAAAGGTGCATGCAAAGGTGGTAAAAACTTCAGATGTAACAATAAAATAATCAGTGCAAGATACTATGTAAAAGATCAACCTTCAGCAAGAGACATTGTTGGGCATGGAAGCCACACAGCATCAATTGCAGCAGGGAATAAAGTAGTGGGAGCAAGCTTCTATGGAATTGCCGAAGGAGTTGCAAGAGGAGGTGTTCCATCGGCAAGAATTGCTGCTTATAGTGTGTGTAGTGAACAAGGATGCACAGATGATGCCATATTGGCTGCTTTTGATGATGCCATTGCCGATGGTGTGGATCTGATCACAATTTCAATTGGGGGAGATGAGCAAATGACCTTTGATGAAGACATCATAGCAATTGGATCTTTTCATGCAATGGAAAAAGGGATCCTCACTATACACTCTGCAGGTAACAATGGCCCTAACATTGTAACATTTAGTGTATCACCTTGGTTATTCACTGTTGCAGCTACTACTATGGATCGTAGAATCATTGATAACGTTTTGCTTGGCAATGGATTAATGATTTCGGGGAAGTCAATAAATGGGTTTGCATCAAATGGGACAAAGATTCCATTGATCCATGGAAAGTTTGCTTCAAGTCCAGCATGTCCATCAGAGAAAGATGCCGAATTTTGTTTTTGTTTGGACCCCAATCGCATAAAGGGAAAAGTCGTCTTGTGTAGAACTTCATTTGGTTATGCAGCGGGTCTTGAATTAGGTGCATTTGGCTCAATTGCAATTTCTTATGAATATGATGCTCAAGTAGTTTCTTATCCTGCAGTAGGCATAGATCCAAAGGTTTATGATGTTGCTTTGTCTTATGCAAATTCCACTACCACCCCTAGTGCTGAAATATTGAGTAGTGCAGGCTTTATAAACAATACTGCTCCAATTGTTGCTGAATTCTCTTCTGTAGGACCCAATATGCTAATCAAAGAAATTATGAAGCCAGACATAAGTGCTCCTGGTATAGAAATTTTGGCTGCTTATTCACCTCTTGCACCACCTTCTCAGGATAAAAGAGATAAAAGATCTGTGAAATACAATATACTCTCTGGAACCTCAATGTCATGCCCCCATGTTGCTGGTGCAGTCGCATATGTTAAGACTTTTCATCCTAATTGGTCTCCGGCAGCTATTAAGTCTTCTCTTATGACCACTGCAAAACCAATGAATGGAAGTGAACTCGCAGAATTCTCCTATGGATCAGGATTTTTGGACCCAGTTAGAGCCATAAATCCTGGTCTAGTTTTTGATGTTTCCAAAGATGACTATGTGAATTTGCTTTGCAGAATTGGGTATGATACATCGAAAGTTCAAAAAATCTCAGGAGACAAAAGTGTTTGCCCTTCATCATCGTCTCATCATCATCTGCCAATGGCAAAAGATTTTAATTATCCTGCAATTGCGGCTGAGATTGAACCAATAAAACCATTTAGGATTAATTTCACAAGAACAGTTACAAATGTTGGATTTGCTAACTCTACCTATAAGGCTTTCTTCCAACAACATTCTGGCATCAACATCACTGTTGTGCCTAACATACTCAAGTTTAAATGTCTCAAGGAGAAACAATCTTTTGTTGTTCATGTTGTTGGAGGGAAATTTAGTGACAAAAGTGTAGTTTCATCGTCACTGTCGTGGACCGATGGAACACATAGTGTAAGGTGTCCAATTATTTTACGTGTTATAAAAGTAGGAGCATGA 1992 0.3971 MVKSYHKSFNGFAAMITNQEREKLKNMEGVVSVFPSKSLKLHTTRSWDFMGFKESIQRNKTGESDVIIGVIDTGIWPESESFNDHGFGPIPKKWKGACKGGKNFRCNNKIISARYYVKDQPSARDIVGHGSHTASIAAGNKVVGASFYGIAEGVARGGVPSARIAAYSVCSEQGCTDDAILAAFDDAIADGVDLITISIGGDEQMTFDEDIIAIGSFHAMEKGILTIHSAGNNGPNIVTFSVSPWLFTVAATTMDRRIIDNVLLGNGLMISGKSINGFASNGTKIPLIHGKFASSPACPSEKDAEFCFCLDPNRIKGKVVLCRTSFGYAAGLELGAFGSIAISYEYDAQVVSYPAVGIDPKVYDVALSYANSTTTPSAEILSSAGFINNTAPIVAEFSSVGPNMLIKEIMKPDISAPGIEILAAYSPLAPPSQDKRDKRSVKYNILSGTSMSCPHVAGAVAYVKTFHPNWSPAAIKSSLMTTAKPMNGSELAEFSYGSGFLDPVRAINPGLVFDVSKDDYVNLLCRIGYDTSKVQKISGDKSVCPSSSSHHHLPMAKDFNYPAIAAEIEPIKPFRINFTRTVTNVGFANSTYKAFFQQHSGINITVVPNILKFKCLKEKQSFVVHVVGGKFSDKSVVSSSLSWTDGTHSVRCPIILRVIKVGA 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03396 663 SUPERFAMILY Subtilisin-like 44 508 IPR036852 GO:0004252|GO:0006508
Aip06g03396 663 CDD PA_subtilisin_like 261 380 - -
Aip06g03396 663 Gene3D - 255 387 - -
Aip06g03396 663 Pfam Subtilase family 64 499 IPR000209 GO:0006508|GO:0008236
Aip06g03396 663 CDD Peptidases_S8_3 39 483 IPR034197 -
Aip06g03396 663 Pfam Peptidase inhibitor I9 2 42 IPR010259 -
Aip06g03396 663 Gene3D - 524 659 - -
Aip06g03396 663 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 1 658 - -
Aip06g03396 663 ProSitePatterns Serine proteases, subtilase family, serine active site. 448 458 IPR023828 -
Aip06g03396 663 Gene3D Peptidase S8/S53 domain 65 520 IPR036852 GO:0004252|GO:0006508
Aip06g03396 663 ProSiteProfiles Serine proteases, subtilase domain profile. 46 507 - -
Aip06g03396 663 PRINTS Subtilisin serine protease family (S8) signature 125 138 IPR015500 -
Aip06g03396 663 PRINTS Subtilisin serine protease family (S8) signature 447 463 IPR015500 -
Aip06g03396 663 PRINTS Subtilisin serine protease family (S8) signature 63 82 IPR015500 -
Aip06g03396 663 Pfam Fibronectin type-III domain 558 655 IPR041469 -
Aip06g03396 663 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 658 IPR045051 -
Aip06g03396 663 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 42 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03396 Aip-Chr6 130830248 130832239 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03396 1 656 Subtilisin-like Serine Gene Family AT3G46850 54.235 0.0 697