Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03388 ATGCATGTGGTGTTATTGGAAGTCTTTGTTTGTAGTTGGCAAGTGGATGCTGTGAGGATGTTGGAATCATGTTGGATAGTAGATGAGGTAATAATGGCATCAAGTAGCAAGTTTTGGAAGGATTCGTGTATGTGGAATGAGCCTCTTGCGGAGTTCTGGATGGAGGGCAATGGTGGTATGTCGAATGCACAGGACACAATGTTTGATACGAGAGTGGAGGAAGATGCTGAGTTATCCGATTGGGAAGGAAGGGGTGCTTCAATGTTGCCCGGATTTTTGGGTTTGGATGGGTTGCGAGCAGAAGATGTTCTTGAAATGGAGTTCTCTTTACCTCAGGAGGCAGGCGGCTTCTATAACAATTACAGCCGACTAAAGGGCTTTGCATCACGGCGAGGCAAGACGGTTAGAAACACTGCCGGAGAGATCGTGCGGTACACTTTTGTTTGTAATAGGCAAGGATTTCGAGAGAAGAAATGGTTGGAAAAGGTTGATCGCAAAAGGGAGCATAAGGTCGTTACCCGATGCGGATGCATGGCGGAGATGAGGATAAAGAGGAAAGACGGCAGTGGGAGGTGGTATGTTTCGCGTTTTGTCGAGGAGCATAACCACGAACTTGCGTATGGGAAGCTTGTTGATTATCTGCGGTCACACAGGAAGATATCTGAGGTAGAAGTTGCTCAGCTAACAAGCATGAGGGAGATTTGGATTAGCATACCTAAGATTTATGAGTCTTTCGCAGCACAACTGGGGGGCTTTAATCTGGTAACATTCACAAAGCAAGATATGTATAATAAGATACGGAAACAGAGAGGTCTGCAAGGCGGAGATGTAAGTGCGGCTATTAGGTACTTGGAAGGTCTGGCACGCATGGATGGGAAAATGTTTTGGCGTTACAAGTTGGGGGTAGGGCAACACCTATGCAACTTGTTTTGGAGCGACGGTCGTTGCCAGGAAGATTATGGGATTTTCGGCGATGTGCTAGCATTCGACGCTACGTATGGCCGCAACAAGTACAACCTACCCGTTGTAGTCTTTTCCGGAGTAAACCACCACAACCAGACATGCGTATTTGGAATAGCAATGGTCTCATGCGAATCGCAGGAGTCATATATTTGGGTTCTTCGCCAGTTTCTGGAATGCATGCAAGGTAAGGCACCGCAATCGGTCATCACGGATGGCGACCCGGCCATGCGGATAGCAATCCAGTCTGTATTTCCCGATGCACATCATCGGTTGTGTGCTTGGCATCTGCTGAGGAACGCGACTGCTAACGTAAGCGACCCGAGATTCACACAAATGTTTAGACACTGCATGTTGGCAGATATGGAAATCGATGAGTTCGAAGCGCATTGGGAGGCAATGCTCAACGAGTGCGGTGTTAGGGAGGTTGAGTGGGTTAAGGACTTGTACACCAAAAAGCACGCTTGGGCCATCGCATACATCCGCGGTAGATTTTTTGCTGGAGTCCGGACTACCTCTAGGTGCGAGTCACTACATGCCAAACTTGGGAGGTTTGTCGAGAGCAGGTACGGGGTGTTAGAATTTGTCAGAAATTTTCAAAGGTGTGTGGATTTTCTGCGTGACACCGAGGACGAGCTAGACTTTCGTTCATGGTACGGAACACCTGTGCTACAAACAGAGTTTGTTGAGCTGGAAAAGTCCAGGTGGACGATGTTCACCCGCGAAATGTTTCTCAGATTCCGGGATAGCCTGAAACGGTGTGTTCGTGTTAGAATTTGTGAATTTAATGACACTGAGAACCCTCATGCATACACTCTCCAGAAGTATCAAAGGCCTGAGATGAATTGGAAGGTTTATAGGGACCCTGTCGCGAACAGATTTACTTGCACCTGCATGCGTTTGGAGTCGTTTGGTATTCCTTGTGTGCATATCCTTTCCGTGTGTGTTAGGCTTGACTTAGTGGAAATCCCTGAAAGCCTTGTGCTGCGCAGGTGGTCTAAGGCAGCCAAAATGGAGGTCCATAACCAATGTGTTGAGCAACACACTGTTGACCGAAGTGTGACCTATAGGACACGAGTGGGTGCTTTCTCCCAGCTTTGTAAGCGTTTAGGGCGTGTTGCGTGCATGAGTGATGAAGACTTCAAGCTTTACTCAAAGAAGCTTCTGAGTGATGCTCTCTTCCTTGAAATAAAGAACGGCCTAAGACCTTCAACGGATGATCTCACAGCAGCACAAGATTGCGGGGTGAAGGACCCGATTCGTGTTAGAACAAAAGGCACGGGTCGGATGAGTCAAGCATGTGGGTCTTCCCTGAAAACCAAAAGAAAGTGCAGCACATGCGGGAAGCTAGGGCACCGGAGGACTAGATGCCCCAACGGAGGCGCACAACCTTCACCAAGGAATGATAAATCATCTGCTGGGATAAATAAACGCAAGCGATCAAAGGCACCCGTCGCTGCCGGAGATAAAACGCAGCCTGAAAATCCATGTCAAGCTGTTGGCTACATTTGGGAACATTTTTCGAATGGAGAAGTGTGA 2499 0.4802 MHVVLLEVFVCSWQVDAVRMLESCWIVDEVIMASSSKFWKDSCMWNEPLAEFWMEGNGGMSNAQDTMFDTRVEEDAELSDWEGRGASMLPGFLGLDGLRAEDVLEMEFSLPQEAGGFYNNYSRLKGFASRRGKTVRNTAGEIVRYTFVCNRQGFREKKWLEKVDRKREHKVVTRCGCMAEMRIKRKDGSGRWYVSRFVEEHNHELAYGKLVDYLRSHRKISEVEVAQLTSMREIWISIPKIYESFAAQLGGFNLVTFTKQDMYNKIRKQRGLQGGDVSAAIRYLEGLARMDGKMFWRYKLGVGQHLCNLFWSDGRCQEDYGIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGIAMVSCESQESYIWVLRQFLECMQGKAPQSVITDGDPAMRIAIQSVFPDAHHRLCAWHLLRNATANVSDPRFTQMFRHCMLADMEIDEFEAHWEAMLNECGVREVEWVKDLYTKKHAWAIAYIRGRFFAGVRTTSRCESLHAKLGRFVESRYGVLEFVRNFQRCVDFLRDTEDELDFRSWYGTPVLQTEFVELEKSRWTMFTREMFLRFRDSLKRCVRVRICEFNDTENPHAYTLQKYQRPEMNWKVYRDPVANRFTCTCMRLESFGIPCVHILSVCVRLDLVEIPESLVLRRWSKAAKMEVHNQCVEQHTVDRSVTYRTRVGAFSQLCKRLGRVACMSDEDFKLYSKKLLSDALFLEIKNGLRPSTDDLTAAQDCGVKDPIRVRTKGTGRMSQACGSSLKTKRKCSTCGKLGHRRTRCPNGGAQPSPRNDKSSAGINKRKRSKAPVAAGDKTQPENPCQAVGYIWEHFSNGEV 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03388 832 SMART 26again6 614 641 IPR006564 GO:0008270
Aip06g03388 832 Pfam FAR1 DNA-binding domain 117 206 IPR004330 -
Aip06g03388 832 MobiDBLite consensus disorder prediction 768 817 - -
Aip06g03388 832 ProSiteProfiles Zinc finger SWIM-type profile. 606 639 IPR007527 GO:0008270
Aip06g03388 832 SUPERFAMILY Retrovirus zinc finger-like domains 743 781 IPR036875 GO:0003676|GO:0008270
Aip06g03388 832 ProSiteProfiles Zinc finger CCHC-type profile. 762 779 IPR001878 GO:0003676|GO:0008270
Aip06g03388 832 Pfam MULE transposase domain 326 420 IPR018289 -
Aip06g03388 832 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 102 679 IPR031052 GO:0006355
Aip06g03388 832 PANTHER OS02G0262500 PROTEIN 102 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03388 Aip-Chr6 130678443 130682237 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g03388 MULE 2.6e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03388 - - aip:107620408 1617.44