Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03371 ATGGCTAGAGAAGTCATTTCCACTCCACCTGGTGCTTCATTTGACTATGATCTCTTGGAAGGTGATTCTGACATTCCGGGAACTGTTTCCAGGGGCACAAGTCCCTGGATAGAACCTGAAAGATTGAAACTCAGACACAGGATTGGTCGGGGACCCTTTGGGGATCTATGGCTAGCAACTCATCATCATTCCACTGAAGATTATGATGAGTACCATGAAGTTGCTGCTAAGATGTTATATCCAATCAGAGAGGATAATACAAAGATTATATTAGAGAAGTTCAATGAATTATATTCTATGTGCCAAGGAGTTGCTAGTGTTTGCTGGCTACATGGAATTTCAATCATAAATGGAAGGATATGCATCATTATGAATTTGTATGAGGGTTCAGTTGGTGACAAGATGGCTAGACTTAGAGAAGGACGGGTTTCGTTGAAAGATGTTTTAAGGTATGGGATCAATCTGGCTCAAGGTGTTTTGGAACTTCACTCTAAAGGGATCCTTATTCTCAACCTTAAACCATTTAATGTTCTTCTTGATGACAATGATCAAGCGATTTTGGGAGATGTTGGCATTCCCAACCTCTTGCTTGGCTCCTCGTGTCTAAGCTCAGATATGGCTCAGAGGCTTGGAACTGCAAATTACATGGCTCCAGAGCAATGGGAACCAGAGATCAGAGGCCCTATATCCTTTGAAACAGACTCGTGGGGATTCGGCTGCACCATTGTTGAAATGTTGACTGGTAATCAACCTTGGTATGGATGTCCTGTTAGTGTAGTTTACAACTCAGTTGTCGAAAAGCATGAAAAACCCCTTGTTCCAAGTGGCCTTCCTTCTTCAATTGAGAATCTCCTCAATGGATGCTTTGAGTATGATTTGAGGAATCGCCCACTGATGAAAGATATTCAGCGTGTCTTCAAAAGCGCACTTGATGAACTGGCAAATGATGGAGGATGGAGATATCTTGGAAATGTGAAAGCTACTGCAAAATCAAGTAGCACTGGCTACACAGAGTGGTTTCTCTCAAAGGATCCTCTTCAAGTGCATGATATGGTGCGATCCAGGAAGTCTTCCAATTCATGCACATCTCAAAATATGGATGTCCCGGGTGGAACTGTTGTTGGCCTAGAACGTAATCCAGATAATGGATTTGTTCTTGTGAGGGTCCATGGAATTCATGACCCAATAAGAGTTCATGCGTCAACTCTTGAACGTGTCACATTTGGCCTTGCGGCTGGCGATTGGGTTCGATTGAAGGATGAAAGCGAGAAACACTCACCAGTTGGCATCTTACATCACATTGACCGTGAAGGTAGAATGACTGTGGGATTTATTGGTTTGCAGACCCTTTGGAAGGGAAATTCTTCGCAGCTCGAAATGGCTAAATCATACTGTGTTGGCCAGTTTGTTAGGCTGAAAGAGAATGTCTTGAGTCCTCGATTTGAATGGCGTAAACGGAGAGGGACCTGGGCTACTGGCAAAATTTCATGGATCCTACCAAACGGGTGTTTGGTCGTCAAGTTCCCAGGGCTGCTGCCTCTTGGTAACGAATCAAGAACCTTCTTGGCTGATCCTTCTGAGGTTGAAATTGTTGATTTCAAGACTTGTCCCGGAATGATAGAGAAGTATCAACATGTAGAGGATCATCATTGGGCAATTAGGCCTGTTCTAATTGCGTTCGGCATATTCACAGCTTTGAAATTTGGCATGTTTGTTGGAAAGAAGGTTGGGAGGAGCATGAAGAAAGTCAATGCAATAGAAAGTGAAGTTGATGGTCAAAATGCTAACAATTCTACAAGGAGATCTTCCACTGCTATTATGAATCCTGGCAACCCAACTTGGGTTCCTTCGGTTGCCAACATTCTCTTCAAAGAAGGTGGCGGTTCCACTCCCACAGCTCGGTAG 1905 0.4357 MAREVISTPPGASFDYDLLEGDSDIPGTVSRGTSPWIEPERLKLRHRIGRGPFGDLWLATHHHSTEDYDEYHEVAAKMLYPIREDNTKIILEKFNELYSMCQGVASVCWLHGISIINGRICIIMNLYEGSVGDKMARLREGRVSLKDVLRYGINLAQGVLELHSKGILILNLKPFNVLLDDNDQAILGDVGIPNLLLGSSCLSSDMAQRLGTANYMAPEQWEPEIRGPISFETDSWGFGCTIVEMLTGNQPWYGCPVSVVYNSVVEKHEKPLVPSGLPSSIENLLNGCFEYDLRNRPLMKDIQRVFKSALDELANDGGWRYLGNVKATAKSSSTGYTEWFLSKDPLQVHDMVRSRKSSNSCTSQNMDVPGGTVVGLERNPDNGFVLVRVHGIHDPIRVHASTLERVTFGLAAGDWVRLKDESEKHSPVGILHHIDREGRMTVGFIGLQTLWKGNSSQLEMAKSYCVGQFVRLKENVLSPRFEWRKRRGTWATGKISWILPNGCLVVKFPGLLPLGNESRTFLADPSEVEIVDFKTCPGMIEKYQHVEDHHWAIRPVLIAFGIFTALKFGMFVGKKVGRSMKKVNAIESEVDGQNANNSTRRSSTAIMNPGNPTWVPSVANILFKEGGGSTPTAR 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03371 634 ProSiteProfiles Protein kinase domain profile. 42 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03371 634 PANTHER OS06G0639500 PROTEIN 1 629 - -
Aip06g03371 634 Gene3D Phosphorylase Kinase; domain 1 28 127 - -
Aip06g03371 634 PANTHER OS06G0639500 PROTEIN 1 629 - -
Aip06g03371 634 SUPERFAMILY Protein kinase-like (PK-like) 39 304 IPR011009 -
Aip06g03371 634 Gene3D Transferase(Phosphotransferase) domain 1 128 333 - -
Aip06g03371 634 MobiDBLite consensus disorder prediction 590 609 - -
Aip06g03371 634 Pfam Protein tyrosine and serine/threonine kinase 42 304 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03371 Aip-Chr6 130498613 130503198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03371 25 313 MAP Kinase Kinase Kinase AT2G17700 25.253 2.65e-21 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Aip06g03371 PK_Tyr_Ser-Thr 7.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03371 - - gsj:114393396 974.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03371 06 130498613 130503198 Aip06g03371 06 130498613 130503198 ECH