Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03366 ATGAAGGATGATATTGTTTTCTTTAGTTGTGACATTATCATCATTCAAGTTAGATTTCAATGCTTCATTTATTGCCGATCTACTTTGCTTCAACAGTATGAAATCAAGACTCATGAAACTAAGAAAGGGGGGAAAATTGTTTGGTCTAGTGACACAGGTGGGAAAGGGGTTTCTTCAATGGAATTGAAGGACACTGGGAATTTGGTTTTGATTGGGAGTAATGATAGTGAAGTGATTTGGCAGAGCTTCGATGATCCGACCGATACATTGCTTCCAATGCAGGAATTCCATAAGGGAATGAAACTTGTTAGTGAGCCTGATTCTAACAACTTTACCTATGTTCTTGAGATTGGAACGTCCGGTGATGTCACTCTTTCGGCCGTGTTACAAACTCTGCAACCAATGCCATATTGGTCTATGCAGAGTGATAGCCGCAGAATCGTCAATAGAGGTGGCAATGAGGTGGCTTCGGCAACCATTGTTGCGAATTCTTGGAGGTTCTATGACAAGAATAAGTCATTGTTGTGGGAATTTGTTTTCAAAGATAATGAGGCTGTGAATGATACTTGGACTGCAGTGTTGGGAAGTGATGGTATTATCACATTCTACAGTCTCCAAAATCAAGGATTGGATGGCGTCGCGCCAAGAAGAATTCCAGAATATTCTTGCAGCACACCGGAGCCTTGTGATCCCTACAATTTATGCACCGGTGACAGAAAGTGCAGCTGTCCTTCTGTTCTAAGCTCTAGGCCTAATTGCAAACCGGGTTTTGCCTCTCCTTGTAACTCGAAAGGTGCAATTGAGCTAGTTAAGGCGGACGATGGACTAAACTACTTTGCGCTCGGGTTCCTTCCACCCTTTTCGAGAACTGATCTGATTGGTTGCAAGACTTCCTGCAGTGAAAATTGTTCATGCCTTGCTATGTTCTTCCAAGAAAGTTCAAGAAGTTGTTTTCTATTGGATTGGATTGGAAGCTTTGAGAAGTCCGATAAGGATACTGGTTTTGTCTCTTACATTAAGGTCTCCAGGGATGGTGGCACTGACAAAGGTGATGGTGGAAATAGTAATAAGCAAACCGTGATTGTTGTGATAATTGTGGTTTTAACATTGCTTGTTATTTCTGGTATGATCTTTCTTGGCCTAAGATACTACAAGAAAAGTGAACATTCAGCCGAGACTCCCCAAGAGAATTCGGATGGTGACACTTTCTTGGAGAACTTAACTGGCATGCCAATTCGCTCTGGCTACAATGATCTTGAAATCGCGACTAATAACTTCTCTGAGAAGCTTGGGCAAGGGGGTTTCGGCTCGGTTTACAAAGGAGTCCTACCAAATGGAACAGAACTAGCTGTGAAAAAGTTGGAAGGAATTGGCCAGGGGAAGAGAGAGTTCAGAGCTGAAGTTAGCATAATTGGTAGCATTCATCATCACCATCTGGTTCGGCTTAAAGGATTTTGCGCCGAAGGAACTCACCGGCTTCTTGCTTATGAGTACATGGCTAATGGCTCCTTGGATAAATGGATATTCAACAAAAACAATGCAGAATTTTCATTGGATTGGGACACAAGGTTCAATATAGCGCTTGGAACTGCGAAAGGACTCGCATACCTTCATGAAGATTGTGACTCAAAGATTGTTCATTGTGATATCAAACCAGAAAATGTGCTTCTAGATGAGAACTTCAATGCCAAAGTTTCAGATTTTGGTCTAGCTAAGCTCATGACGCGCGAACAAAGCCATGTTTTCACAACACTAAGGGGGACTCGAGGGTATCTCGCCCCTGAGTGGATAACAAACTACGCCATATCAGAGAAGAGTGATGTATACAGCTATGGTATGGTTTTGTTAGAGATAATTGGCGGCCGGAAAAACTATGATCCGGCCGAAAGCTCGGAGAAATCCTATTTCCCATATTTTACATTCAAGATGATGGAAGAAGGGAAACTAAGAGACATTGTTGATTCAGAATTGAAAGCATATGAAGATGATGAGAGGGTAGACATTGCAATCAAAGTTGCATTGTGGTGCATACAAGAAGACATGAATCTAAGGCCTTCAATGAGCAAAGTTGTGCAAATGCTTGAAGTGAGGCTGGAACTTCTTCATCAGCACCATCAGATACTAACACTGAAGCTTTTCTCCGTGGGGTTCAACTTTCAGGGCCAAGATAAGTAG 2175 0.4225 MKDDIVFFSCDIIIIQVRFQCFIYCRSTLLQQYEIKTHETKKGGKIVWSSDTGGKGVSSMELKDTGNLVLIGSNDSEVIWQSFDDPTDTLLPMQEFHKGMKLVSEPDSNNFTYVLEIGTSGDVTLSAVLQTLQPMPYWSMQSDSRRIVNRGGNEVASATIVANSWRFYDKNKSLLWEFVFKDNEAVNDTWTAVLGSDGIITFYSLQNQGLDGVAPRRIPEYSCSTPEPCDPYNLCTGDRKCSCPSVLSSRPNCKPGFASPCNSKGAIELVKADDGLNYFALGFLPPFSRTDLIGCKTSCSENCSCLAMFFQESSRSCFLLDWIGSFEKSDKDTGFVSYIKVSRDGGTDKGDGGNSNKQTVIVVIIVVLTLLVISGMIFLGLRYYKKSEHSAETPQENSDGDTFLENLTGMPIRSGYNDLEIATNNFSEKLGQGGFGSVYKGVLPNGTELAVKKLEGIGQGKREFRAEVSIIGSIHHHHLVRLKGFCAEGTHRLLAYEYMANGSLDKWIFNKNNAEFSLDWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDENFNAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPAESSEKSYFPYFTFKMMEEGKLRDIVDSELKAYEDDERVDIAIKVALWCIQEDMNLRPSMSKVVQMLEVRLELLHQHHQILTLKLFSVGFNFQGQDK 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03366 724 ProSitePatterns Protein kinases ATP-binding region signature. 430 453 IPR017441 GO:0005524
Aip06g03366 724 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 41 696 - -
Aip06g03366 724 ProSiteProfiles Protein kinase domain profile. 424 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03366 724 Pfam Protein kinase domain 427 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03366 724 SUPERFAMILY Protein kinase-like (PK-like) 408 696 IPR011009 -
Aip06g03366 724 SUPERFAMILY alpha-D-mannose-specific plant lectins 43 104 IPR036426 -
Aip06g03366 724 Gene3D - 27 82 IPR036426 -
Aip06g03366 724 Gene3D Transferase(Phosphotransferase) domain 1 499 707 - -
Aip06g03366 724 PIRSF SRK 25 714 IPR024171 GO:0004674
Aip06g03366 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 545 557 IPR008271 GO:0004672|GO:0006468
Aip06g03366 724 Pfam D-mannose binding lectin 42 97 IPR001480 -
Aip06g03366 724 SMART serkin_6 424 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03366 724 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 41 696 - -
Aip06g03366 724 Gene3D Phosphorylase Kinase; domain 1 387 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03366 Aip-Chr6 130442693 130447458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03366 371 698 Receptor kinase-like Gene Family AT5G20050 44.986 3.57e-93 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip06g03366 Pkinase 5.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03366 - - adu:107495387 1308.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03366 06 130442693 130447458 Aip06g03366 06 130442693 130447458 ECH
Aip06g03366 06 130442693 130447458 Aip08g03078 08 120543474 120553529 ECH
Aip06g03366 06 130442693 130447458 Aip08g03078 08 120543474 120553529 PCT