Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03364 ATGGATGAGGGACATTGTTTCGGCAACGGGTGCTGTAAGGTGGATATTCCTACCGGAAAAACAACGGCCACAATTCAAGTAGCAACCTATCTCTACTGTAGCTATTCTTTTGTCGTCAAGAATGGTTACTACTCGTTTTTGAAGGACCACTTGGAGAATCTACCATATCAGATGTTACCTGTGGTTTTTGATTGGAGTGTTGGAAACAAGACGTATAAAGAATCTGAGCAGAGAGGTACCAACGCTTGCAAGGGAAATAGTACTTGTGTGGAGACAGAGAGTGGATATGGTTACCGGTGTCAATGCAACCAAGGTTTTGAAGGAAATCCATACCTTCATGCTTGCACAGACATTAATGAATGTGATAGGCAGATTCATACATGTCTAATTCTTGTACAAGCAGTAGTAGCTAGTAATCAAATATCTCTTAGTAGATTCCAAAGTGAGTGTTATGGTATTCAAATTCCATATCCATTTGGCATAGAAAATTCATCTACCGGTGCTACCTATTTCTTAGAAGAATCCTTTGAACTTACTTGCAACAGTACTATTTCCAATTTAATATGGGACAATAAGTCAGTCATAGCCATAAACGTCTCCCAAGGTCAAATAGATATATTGATTTCTGCCATCCAAATTTGTTATGATAGTCGCCTCGGTAATCCCGTTGGTCTTACCCCTCCCTTCGGAATCACAAATAGTCTTTTTTTCATCATTTCAAACAAAGACATCAAGTACATAGTTGTTGGCTACAGTACTTTCAGCTATCTTACTATCTACAGCAACACCAGCGGTTCTATAGTGGTGTGCGTAACTCAATGTCATAATATCATGAGTATGGATGAGGGACATTGTTCCGGCAATGGGTGCTGTATGGTGGATATTCCTACCGGAATGACAATGGTCACAATTCAAGTAGCAACCTATCTCTACTGTAGCTATTCCTTTGTCGTCAAGAATGGTTACTACTCGTTTTCGAAGGACCACTTGGAGAATCTACCATATCAGATATTACCTGTGGTTTTTGATTGGAGTGTTGGAAACAAGACGTGTAAAGAATCTTTGAGCAGAGGTACCAACGCTTGCAAGGGAAATAGTACTTGTGTGGAGGCAGAGAGCGGATATGGTTACCGGTGTCAATGCAACCAAGGTTTTGAAGGAAATCCATACCTTCATGCTTGCACAGACATTAATGAATGTGATAGGCATATTCATATATGTCTAAGTAGGGATAACTGTCTCAATTCAATTGGATCATATTCATGCTTTTGTCCTAACGGACAATTAGGAAATGGATCAGTTATAGGAGGTTGCCATGAGAAAATTCACAGAAATATGCTTCCAAAAATTGTCACTGGTAAGCATTTTCACCGAGAAGAGTCCTCTCGTACAACTAAAATTTTTACTGCCGAACAGTTGAAGAAGGCCACCAACAACTACGATGACAACTTAGTTGTTGGCAGGGGAGGTTTTGGCACAGTATACAAAGAACTTCTAGAGAATGACAAAGATGTTGCCATCAAGAAGTCCAAAACAGTTAATCCTAAACAAGTTGAGCAATTCATCAATGAGGTTATTATTTTGTCTCAAATTAACCGTAGAAATATTGTGAAGCTTTTGGGTTGCTGTTTAGAAACAGAAGTCCCTCTTCTTGTCTATGAATTTGTAAGCAATGGCATAGTCTTCGATTTTATCCGTAATGAAAACAAGAGAAATAATTTCAATTGGAAAAATCGTCTCAAAGTTGCAGCAGAGGCAGCCGGAGCTTTATCGTATCTTCACTCAGCTGCTTCCATACCAATTGTCCACAGAGATGTTAAGAGTGCCAACATTTTCTTAGATGCCAAAGTCTCTGACTTTGGAACTTCAAGATTCATTCCACTGGATCAAGTTGCATTGGCTACAATGGTGCAAGGAACTTTTGGTTATTTGGATCCAGAATTCATGCAAACCAGCCAACTCACTGAGAAAAACGATGTGTATAGCTTTGGCGTTGTGCTGGCAGAGCTTCTTACAGGACAGAAAGCTCTTTCATTTGAGAGGCCGGAAGGGAAGGAAAATCTTGCTATCTACTTTCCTTGCCTGAAGGAGAATCGCTTGTTTGAAGCTCTTCAAGTTGGAATCTTGAATGAAGATAACAAGCAGCAGATTGTGGAAGTTGCTAATGTTACTGCAAAGTGTTTGAAACTCAAAGGGGAAGAGAGACCATACATGAAGGAAGTGGCAGGGGAATTGGAAGGAATAATAATGCATTAA 2256 0.3976 MDEGHCFGNGCCKVDIPTGKTTATIQVATYLYCSYSFVVKNGYYSFLKDHLENLPYQMLPVVFDWSVGNKTYKESEQRGTNACKGNSTCVETESGYGYRCQCNQGFEGNPYLHACTDINECDRQIHTCLILVQAVVASNQISLSRFQSECYGIQIPYPFGIENSSTGATYFLEESFELTCNSTISNLIWDNKSVIAINVSQGQIDILISAIQICYDSRLGNPVGLTPPFGITNSLFFIISNKDIKYIVVGYSTFSYLTIYSNTSGSIVVCVTQCHNIMSMDEGHCSGNGCCMVDIPTGMTMVTIQVATYLYCSYSFVVKNGYYSFSKDHLENLPYQILPVVFDWSVGNKTCKESLSRGTNACKGNSTCVEAESGYGYRCQCNQGFEGNPYLHACTDINECDRHIHICLSRDNCLNSIGSYSCFCPNGQLGNGSVIGGCHEKIHRNMLPKIVTGKHFHREESSRTTKIFTAEQLKKATNNYDDNLVVGRGGFGTVYKELLENDKDVAIKKSKTVNPKQVEQFINEVIILSQINRRNIVKLLGCCLETEVPLLVYEFVSNGIVFDFIRNENKRNNFNWKNRLKVAAEAAGALSYLHSAASIPIVHRDVKSANIFLDAKVSDFGTSRFIPLDQVALATMVQGTFGYLDPEFMQTSQLTEKNDVYSFGVVLAELLTGQKALSFERPEGKENLAIYFPCLKENRLFEALQVGILNEDNKQQIVEVANVTAKCLKLKGEERPYMKEVAGELEGIIMH 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03364 751 ProSitePatterns Calcium-binding EGF-like domain signature. 396 422 IPR018097 GO:0005509
Aip06g03364 751 ProSiteProfiles EGF-like domain profile. 353 395 IPR000742 -
Aip06g03364 751 Gene3D Laminin 398 434 - -
Aip06g03364 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 461 750 - -
Aip06g03364 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 133 438 - -
Aip06g03364 751 ProSiteProfiles Protein kinase domain profile. 480 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03364 751 SMART egf_5 399 439 IPR000742 -
Aip06g03364 751 SMART egf_5 76 116 IPR000742 -
Aip06g03364 751 SMART egf_5 350 395 IPR000742 -
Aip06g03364 751 ProSitePatterns EGF-like domain signature 2. 379 394 IPR000742 -
Aip06g03364 751 ProSitePatterns EGF-like domain signature 2. 100 115 IPR000742 -
Aip06g03364 751 SMART serkin_6 480 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03364 751 ProSiteProfiles EGF-like domain profile. 74 116 IPR000742 -
Aip06g03364 751 SMART egfca_6 396 439 IPR001881 GO:0005509
Aip06g03364 751 Gene3D Transferase(Phosphotransferase) domain 1 556 751 - -
Aip06g03364 751 CDD EGF_CA 396 427 - -
Aip06g03364 751 Gene3D Laminin 74 122 - -
Aip06g03364 751 Gene3D Laminin 349 397 - -
Aip06g03364 751 ProSiteProfiles EGF-like domain profile. 396 434 IPR000742 -
Aip06g03364 751 CDD EGF_CA 81 108 - -
Aip06g03364 751 Gene3D Phosphorylase Kinase; domain 1 453 555 - -
Aip06g03364 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 4 131 - -
Aip06g03364 751 SUPERFAMILY Protein kinase-like (PK-like) 460 745 IPR011009 -
Aip06g03364 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 4 131 IPR045274 GO:0007166
Aip06g03364 751 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 413 424 IPR000152 -
Aip06g03364 751 Pfam Protein kinase domain 483 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03364 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 601 613 IPR008271 GO:0004672|GO:0006468
Aip06g03364 751 Pfam Calcium-binding EGF domain 396 428 IPR001881 GO:0005509
Aip06g03364 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 461 750 IPR045274 GO:0007166
Aip06g03364 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 133 438 IPR045274 GO:0007166
Aip06g03364 751 SUPERFAMILY EGF/Laminin 396 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03364 Aip-Chr6 130409949 130415381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03364 147 748 Receptor kinase-like Gene Family AT1G21230 42.268 6.34e-158 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Aip06g03364 PK_Tyr_Ser-Thr 9.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03364 - - gsj:114381577 644.425