Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03329 ATGGCAAAGAAGAAGAATCCCCACGTGTATATGGATGTTTCTATAGACGGAGATCCAGTTGAGAGGATGGTTTTTGAGCTCTTCTATGACATTGCTCCAAAGACTGCAGAAAATTTTCGTGCACTGTGTACAGGAGAAAAAGGAGTTAGCCCAAATACTGGGAAATCACTACACTACAAGGGTTCTTTCTTCCATTACATTCTGAAAGGTTCTATTGTGCGGGGTGGCGATTTTGTCAATCGAAACGGGACTGGTGGGGAAAGCATATATGGTTCAAAGTTTCCAGATGAGTCGCCTAGGCTGAAGCATGATTCTTCAGGCCTTTTATCAATGGCAATTGCTGATCGCGAAACACTGGGTTCTCATTTTATCATCACTTTAAAAGCGGATCACCATCTTGATAGAAAGCATGTAGTCTTTGGCAAGCTTGTCCACGGGCATAATGTGTTGAAGAAAATTGAAGACACAGGTGATGAAGAAGGGCATCCAACTGTGACCGTTAAAATAATTAATTGTGGTGAATTCAATGACGATGGAAAGAAGATAAATAAATCTGAAGCCAATAGTCAAGAAATGCAGCGTAAGGGAAAGCACAAAAAATCTTCAAGAGACCGAAGAAAAAGGAGAAAATACGACTCATCAGATTCTGAGAGTTCTGATTCGGACATGGAATCTTCGGAAAGTGATAGTGATTCTGAGTCGGATGGTTCTTCATCATCTTATATAAGTTCCTCTAGTGATGACAGGCGAAGGAAGAGAAAGAGGTCTTCGAGGAAGGATAAACATAGACGTGGAAAGCGAAGAGATAAACGCCGAGATAAGAGGCGCAGGAAGCGTGACAAGAAGTCAAAACGTAGATCAAAACGGGATTCTGGTAGTCTAACTGATTCGGATAGTGGAACTAAGAGTGGCAATAGCCCTGATTGCAGAAGTCAAGCTGATGGGAAAGATCTGAAGCATAAAGATCATGCGCATAAAAATGCTGAAGATCAGTCTCCATTAAATGTGGAGAATGAATTGCCTCTTGCACATCGGAAAAAGCGGGAGGAACTGGATATGCCAGAGGAAGAATTTCCGAAGGAGAATGGAGCACGGCGCAGCAATGGCATAGGAACCAACCATCGATCTGACAGAAGTGAAGAAAGGCAGCCTGATGTGGTTGATGATCATCCAGGGAAATCTAGGAGTCGAAGCATGAGTCCTAAGCGAGCTGTGAGTAAGAGTATGAGTATTAGTCCCAGGGGTGGAAACAGAAGCCCAAGCCCAAGTCCAGGCAGGAGTTTGAGCAGAAGTCCAAGTCGTAGTAGAAGCCCTCCTGCTCCATCAAGGCGGAGTTTGAGCAGGAGTCCTGCTAGAAGCATAAGCAGAAGTCCTGTTAGAAGGACAAGCAGAAGTCCAGACCGAAGCATCATTAGAAGCCCAGTGAGGGGTAGGAAGGGGAGAAGTGTCAGCAGAAGCCCCATGAGAACTCGCAATCATAGAAGTATCAGTAGAAGCTCTGGGAGAATCCGTGATCGCAGTGTGAGTAGAAGTCCTGTGAGAGCCCGTGATCGCAGAAGTATCAGTAGAAGCCCTGTGAGAGCTCGTGATCGTGGAAGTGTCAGCCGAAGCCCTGTGAGATCCCATTCTCGCAGTCATCGGAGCAGAAGTTCTCCCAGACCACCACCAAGAAGAACAATCAGTAGGAGCCCTGTGCGAGTGTCAAGAAAGAGCATAAGCCGAAGTCCAGTTAGGTCCTCTGCCAGAAGCTTGAGTAGAAGCTCTGGGAGGGTTCCTTTGAGAAGCATTAGTAGAAGCCCTGTCAGAGCCCCAAGTAGAAGTGATCGCCGCAGCTATTCTAGGAGTCGCAGCCCTGTCCGTAGGACAAGGACACCTCGTGGTAGGAGCATTTCGAGAAGCGTCTCACCTGATGCTTCACCAAAGCGTATCAGAAGGGGAAGAGGTTTTAGTGAACGATATTCTTATGCCAGAAGGTATAGAACCCCTTCTCGTTCTCCTGTGAGGTCATACCGCTACAATGGAAGAAGTGACCGTGACAGATACACAAGTTATAGGAGGTATTCCCCCAGGCGATACAGGAGCCCACCACCACGTGCAAGATCTCCTCCAAGATACCGAGGCAGGAGGAGCAGGACACCTTTATCACGCAGCCCTCGTTATCGCAGTCGACGATATAGCAGAAGCCGTAGCCCTGTTCGCAGCCGTTCACCAGTTGAACCATATCGAGCTCGTGTCTCTCCTCGTGTGGAGAGGCGCATGTCCTCATCTCGGAGCAGGAGTCCGTCACGATCGAGGTCTTCTGTAGAATCACAATCTCCACGAAAAGCAAGCGGAGTAAACAGGTCAAGGTCGTCATCCGGAAGCCCAAATGGAAAGAAAGGCCTAGTCTCGTATGAAGATGGTTCTCCTGACTCAAGCCCGAGGTAA 2427 0.4751 MAKKKNPHVYMDVSIDGDPVERMVFELFYDIAPKTAENFRALCTGEKGVSPNTGKSLHYKGSFFHYILKGSIVRGGDFVNRNGTGGESIYGSKFPDESPRLKHDSSGLLSMAIADRETLGSHFIITLKADHHLDRKHVVFGKLVHGHNVLKKIEDTGDEEGHPTVTVKIINCGEFNDDGKKINKSEANSQEMQRKGKHKKSSRDRRKRRKYDSSDSESSDSDMESSESDSDSESDGSSSSYISSSSDDRRRKRKRSSRKDKHRRGKRRDKRRDKRRRKRDKKSKRRSKRDSGSLTDSDSGTKSGNSPDCRSQADGKDLKHKDHAHKNAEDQSPLNVENELPLAHRKKREELDMPEEEFPKENGARRSNGIGTNHRSDRSEERQPDVVDDHPGKSRSRSMSPKRAVSKSMSISPRGGNRSPSPSPGRSLSRSPSRSRSPPAPSRRSLSRSPARSISRSPVRRTSRSPDRSIIRSPVRGRKGRSVSRSPMRTRNHRSISRSSGRIRDRSVSRSPVRARDRRSISRSPVRARDRGSVSRSPVRSHSRSHRSRSSPRPPPRRTISRSPVRVSRKSISRSPVRSSARSLSRSSGRVPLRSISRSPVRAPSRSDRRSYSRSRSPVRRTRTPRGRSISRSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSDRDRYTSYRRYSPRRYRSPPPRARSPPRYRGRRSRTPLSRSPRYRSRRYSRSRSPVRSRSPVEPYRARVSPRVERRMSSSRSRSPSRSRSSVESQSPRKASGVNRSRSSSGSPNGKKGLVSYEDGSPDSSPR 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03329 808 MobiDBLite consensus disorder prediction 312 332 - -
Aip06g03329 808 MobiDBLite consensus disorder prediction 399 460 - -
Aip06g03329 808 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Aip06g03329 808 MobiDBLite consensus disorder prediction 638 658 - -
Aip06g03329 808 MobiDBLite consensus disorder prediction 176 197 - -
Aip06g03329 808 MobiDBLite consensus disorder prediction 340 363 - -
Aip06g03329 808 MobiDBLite consensus disorder prediction 478 497 - -
Aip06g03329 808 MobiDBLite consensus disorder prediction 565 594 - -
Aip06g03329 808 SUPERFAMILY Cyclophilin-like 4 178 IPR029000 -
Aip06g03329 808 MobiDBLite consensus disorder prediction 498 537 - -
Aip06g03329 808 MobiDBLite consensus disorder prediction 759 792 - -
Aip06g03329 808 MobiDBLite consensus disorder prediction 296 310 - -
Aip06g03329 808 MobiDBLite consensus disorder prediction 176 808 - -
Aip06g03329 808 Gene3D - 1 176 IPR029000 -
Aip06g03329 808 MobiDBLite consensus disorder prediction 671 686 - -
Aip06g03329 808 MobiDBLite consensus disorder prediction 371 396 - -
Aip06g03329 808 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Aip06g03329 808 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Aip06g03329 808 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Aip06g03329 808 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Aip06g03329 808 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Aip06g03329 808 MobiDBLite consensus disorder prediction 702 730 - -
Aip06g03329 808 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Aip06g03329 808 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 380 - -
Aip06g03329 808 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 1 380 - -
Aip06g03329 808 MobiDBLite consensus disorder prediction 251 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03329 Aip-Chr6 129944395 129952702 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03329 25 175 U-box Gene Family AT5G67530 38.562 1.89e-19 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03329 K09566 - oeu:111388106 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03329 06 129944395 129952702 Aip06g03329 06 129944395 129952702 ECH