Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03328 ATGGGAGTGAAGGGAATGTTATTTATTATTGTTGCCTTGGTCCTTGTAGAAGTGGAAGTAGAAGTAGTAGCTATAGATGATATTGATAGTACTCAAATAGCCCTTGATGGGTGCCGAAGGAAGTGTGGAGATGTTCAAATTCCATATCCATTTGGTGTAGGAAAAACCGTAAACGGTACTACCTGTTTCTTAGAGAAATCATTTAATCTTACTTGCAACAGTAGTAGTTCTAGTTTAACATCGGGCAATGTCCATGTCATAAACATAAACATCTCCCAAGGTCAAGCAGATATGTTGATTTTTGTCTCCAAATATTGTTATGATAATATCTATGGTAACACCAGTGTAATTAGCCTACCCCATAGGCTCACAAGTAGTCCTTCTTTCACCATTTCCAGCAAAGACAACAAGTTCATAAGTGTTGGCTGCGATACTTACGGCTATCTTAATAGCTTCTACAACAATTCAAATTATTCGACGGGATGCTTAACAAGATGTTATGGCAACACTATGGAAATCAAGGATGGAGATTGTTCCGGCATCGGGTGCTGTGAGGTGGATATTCCTCCTAGAATGAGAAACGTCTCTACTCAAGTAGGTACCTTTCAGAATTTTCAAAGTTCTTTGGCCTTCAACAACTGTAGCTATTCCTTTGTTGTCAAGAATGACAACTACACGTTTTCCAAGGCTCACTTGGAGAATCTACCATATGAGATGCTTCCTGTGGTGTTCAATTGGAGTGTTGGAAACAAAACATGTAAAGAATCTTTCAACAGAGGTACCAACACTTGCAAGGGAAATAGTATTTGTTTGGATGCAAAGAGTGGACATGGTTACCGGTGTCAATGCAAGCAAGGTTTTGAAGGAAATCCATATCATCCGCATGGTTGCATAGACATTGATGAATGCAACACAAGACAACATTCATGTGTAAGTGACCATAATTGTCACAATACAAATGGATCCTACATATGCTTATGTCCTAAGGGGCAATCTGGAAATGGTATCAAGGAAGATGGTTGCCACAAGAAGAATTTCCTTCCACTATTCTATTCTAGCATATATATATATATAAAAGATAAGATCAatcatattaaatGGACTAGTGCAGGATTTATAGCTATTTTGGTGGGGACTTGTTTGTTATACCTAACGTATCAAAAGAGAAAACTCATCAAACTAAAAGAGAAGTTTTTTGAGCAGAACGGTGGTCTTATTTTGCTACAACAAGGAGAAGAGTCCTCCCATACTAAAATTTTCACCGCTGACAAATTGAAGAAAGCCACCAACAACTATGATGAGAATTTAATCATTGGCAGAGGAGGTTATGGCACAATTTTTAAAGGAGTTCTGGAGAATAAAACAATTGTTGCTATTAAGAAGTCCAAAATAGTTGATCCTGACCAAGTTGTGCAATTCATAAATGAGGTGATTGTTTTGTCCCAAATTAACCATAGAAATGTGGTGAAGCTTTTGGGTTGTTGTTTAGAAACAGAAGTCCCTCTACTAGTTTATGAGTTTGTAAGCAATGGCACACTCTTTGATTTTATCCATAATGAAAACAAGAGAAATTATTTCAATTGGGAAAATCGTCTCAGAATCGCAACAGAGACAGCAGGAGCTTTATCATATCTTCACTCAGCTGCTTCCATACCAATTGTCCACAGAGATGTTAAGAGCGCCAACATTCTCTTAGACGAAGATTACACTGCCAAAGTCTCTGATTTTGGAGCTTCTAGATTTGTTCCATTGGATCAAACTGCACTAGCTACAATGGTGCAAGGAACTTTTGGTTATTTGGATCCAGAATACATGCAAACTAGCCAACTAACCGAGAAAAGTGATGTGTATAGCTTTGGTGTTGTGCTCGCGGAGCTTCTTACAGGAAAGAAACCTTTTTCATTTGAGAAGTCGGAAGAGAAGACAAATCTTGCTAAGTACTTCTTATCTTGCGTGAAAGAGGATTGCTTGTTGGAGGCTCTTCAAGTTGGAATACTGAATGAAGGAAATAAGCAGGAGATTGTGGAAGTTGCTATTATTGCAACAAAGTGTTTGAGACTTACAGGGGAAGAAAGACCAAGTATGAAGGAAGTGGCAATGGAATTGGAGGGAATAAGGCTAATGTCAAAGCATCAGTGGGTTAATAATGGAGACAAGAATTTTGAAGAGATCCAACACTTACTTCCTATATCATCATCGTCAGAAAGATATGAACATGGTGATAGCAGTAGTGGTCATCAAACTACACAATATGATAGCATCATGAAGGATCAAGAAGTGCTAATTGCCTTACCAAGTGGAAGATGA 2307 0.3806 MGVKGMLFIIVALVLVEVEVEVVAIDDIDSTQIALDGCRRKCGDVQIPYPFGVGKTVNGTTCFLEKSFNLTCNSSSSSLTSGNVHVININISQGQADMLIFVSKYCYDNIYGNTSVISLPHRLTSSPSFTISSKDNKFISVGCDTYGYLNSFYNNSNYSTGCLTRCYGNTMEIKDGDCSGIGCCEVDIPPRMRNVSTQVGTFQNFQSSLAFNNCSYSFVVKNDNYTFSKAHLENLPYEMLPVVFNWSVGNKTCKESFNRGTNTCKGNSICLDAKSGHGYRCQCKQGFEGNPYHPHGCIDIDECNTRQHSCVSDHNCHNTNGSYICLCPKGQSGNGIKEDGCHKKNFLPLFYSSIYIYIKDKINHIKWTSAGFIAILVGTCLLYLTYQKRKLIKLKEKFFEQNGGLILLQQGEESSHTKIFTADKLKKATNNYDENLIIGRGGYGTIFKGVLENKTIVAIKKSKIVDPDQVVQFINEVIVLSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLFDFIHNENKRNYFNWENRLRIATETAGALSYLHSAASIPIVHRDVKSANILLDEDYTAKVSDFGASRFVPLDQTALATMVQGTFGYLDPEYMQTSQLTEKSDVYSFGVVLAELLTGKKPFSFEKSEEKTNLAKYFLSCVKEDCLLEALQVGILNEGNKQEIVEVAIIATKCLRLTGEERPSMKEVAMELEGIRLMSKHQWVNNGDKNFEEIQHLLPISSSSERYEHGDSSSGHQTTQYDSIMKDQEVLIALPSGR 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03328 768 SMART egf_5 252 298 IPR000742 -
Aip06g03328 768 SMART egf_5 302 342 IPR000742 -
Aip06g03328 768 SUPERFAMILY Protein kinase-like (PK-like) 414 703 IPR011009 -
Aip06g03328 768 ProSitePatterns Calcium-binding EGF-like domain signature. 299 325 IPR018097 GO:0005509
Aip06g03328 768 ProSiteProfiles EGF-like domain profile. 256 290 IPR000742 -
Aip06g03328 768 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 316 327 IPR000152 -
Aip06g03328 768 CDD EGF_CA 299 333 - -
Aip06g03328 768 CDD STKc_IRAK 438 705 - -
Aip06g03328 768 SMART egfca_6 299 342 IPR001881 GO:0005509
Aip06g03328 768 SMART serkin_6 432 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03328 768 SUPERFAMILY EGF/Laminin 299 334 - -
Aip06g03328 768 Pfam Calcium-binding EGF domain 299 339 IPR001881 GO:0005509
Aip06g03328 768 Gene3D Laminin 251 302 - -
Aip06g03328 768 ProSitePatterns Protein kinases ATP-binding region signature. 438 461 IPR017441 GO:0005524
Aip06g03328 768 Pfam Wall-associated receptor kinase galacturonan-binding 38 93 IPR025287 GO:0030247
Aip06g03328 768 Pfam Protein kinase domain 434 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03328 768 Gene3D Laminin 303 341 - -
Aip06g03328 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 553 565 IPR008271 GO:0004672|GO:0006468
Aip06g03328 768 Gene3D Phosphorylase Kinase; domain 1 407 507 - -
Aip06g03328 768 ProSiteProfiles Protein kinase domain profile. 432 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03328 768 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 18 731 - -
Aip06g03328 768 Gene3D Transferase(Phosphotransferase) domain 1 508 726 - -
Aip06g03328 768 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 731 IPR045274 GO:0007166
Aip06g03328 768 ProSiteProfiles EGF-like domain profile. 299 342 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03328 Aip-Chr6 129916224 129918838 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03328 36 754 Receptor kinase-like Gene Family AT1G21230 47.696 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Aip06g03328 Pkinase 3.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03328 - - adu:107495457 926.776