Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03325 ATGCTAATTGTTGCACTAGTCCCTCTAGGAGTAGTAGCTGCAAATCGTGACCATAATCAAGCTCTTGATGGGTGCCGAAGAGAGTGTGGAGGTGTTCAAATTCCATATCCATTTGGAATAGGAAAATCAAAAACAACCGGCGAGAATTGTTCCATGGACGAACCATTCGAACTCACTTGCGAAGAACAAGATTCCATTTTGAAATCCGGAGATTTCCAAGTCACATCCATAAACATCACCAAAGGCCAAGTTGAAATGATGGCACCAGTTTCCAAATCTTGCAGAGACACAAGCAGTGACGAAACAACGTACCTCGTCACTTTTCCATCTTTCACGGTTTCTAGAAACGACAACAAGTTCGTTAGTGTCGGTTGCGACACTTTCGGCTACCTTAATAGCTCCTATGATGGTGGGAGAACATATTCAACTGGGTGTTTATCAAGATGCTATGGCAATATGTTTGATATCGTTGATGAAAGTTGTTCCGGATTCGGGTGTTGTCAGATGGATATTCCTCCTAACATGGTGAATATCTCTATCCAAGCAGCAAGCTTTGATAATTTCGAAGAATCTTTGAGTTTCAACGATTGCAGCTATTCTTTCGTTGTCAAAAATGGAAACTATACGTTTTATAAGAAGGATTTGAAGAAGCTGCGTTTTGATGATGTCGCTGTGATCTATGATTGGAGTATTGGAAATGAAACATGCGAGGCTTCTAAAAACAGAGGTACCAATGCTTGCAAAGGAAATAGCAAGTGTGTGAGATTTAATGCCAATGGTTACCAATGTCGATGCAAGTTTGGTTTTGAAGGAAACCCATACCATCCTGATGGTTGCTCAGACATTGATGAATGTAAGATAGGAAGACATGATTGCATAAGTGATGATAACTGCCATAATATGAATGGAACATACCGATGTTTTTGTCCTAAGGGACAACATGGAAATGGAACAAAGGAAGGAAGGTGTCAAGAGAATAATGCACTTCCCAAGTTTGTCATTGGTGGAGGTGCAGGATTCATTGCTCTTTTTGCGGTGATTTTCTTTCTATACTGGATGTATCAAAAAAGAAAACTCAGCAAACTAAAAGAGAAATTTTTCAAACAAAATGGTGGTTATATTCTGCTACAACAGATTTCTACAAGAGGAGAATCCTCTCAAACAGTTCAACTCTTTACAGAAGATGAACTGAAGAAGGCCACAAAGAACTATGATGATAAGCTAATCATCGGCAGAGGAGGATATGGCACAGTTTTCAAAGGAGTTCTAACGAATAACAGAATTGTCGCAATAAAAAAATCTAAAATAGTTGATGAAAGCCAAATTGAACAATTCATTAACGAGGTGGTTGTTCTGTCTCGAATCAATCATCGTAACGTAGTGAAACTTTTAGGTTGTTGTTTAGAGACAGAGGTTCCTTTACTAGTTTACGAATTCATTAACAATGGTACACTTTTCAATTTCATGCACAAGGGTAGAAATGCAAATAATTTGGTTTGGGAGACCCGTTTGAGAATAGCAACAGAAGCAGCAGGAGCTTTATCATATTTGCACTCAGCAGCCTCAATTCCAATTATCCATAGAGATATCAAAAGTGCCAATATTCTATTAGATAGCACTTACACTGCTAAAGTATCTGATTTTGGAGCTTCAAGATTTGTTCCACAAGATCAAATTGCATTAGCCACCATGGTGCAAGGAACTATTGGATATTTGGACCCTGAGTACATGCAAACAAGCCAATTGACTGAGAAAAGTGATGTTTATAGTTTTGGAGTGGTGCTTGCAGAGCTTCTAACAGGCTCCGACGCAATTCAGGATGGAATTCTGAATGAGAAAAATGAGCAAGAGATCAAGGAGGTTGCTATTCTTGCTGCAAAATGTTTAAGCCTTAAAGGGGAAGATAGACCAAGCATGAAGGAAGTGGCAATGGAATTGGAAGGAATTAGGGTATTGCAAAAGCACCCTTGGAGCAATAATAATGGAGACAACAATCTAGCAGAAACTCAATGCTTGGTTCTTGATGAGTCTTCATCAAGAATACACATGCATAGTGAACGTTGTAGCCATCAAAATTATAGGTATGATAGTATCAATGATCAACTGTCAAGTTCCTTAGATGGAAGATGA 2130 0.3883 MLIVALVPLGVVAANRDHNQALDGCRRECGGVQIPYPFGIGKSKTTGENCSMDEPFELTCEEQDSILKSGDFQVTSINITKGQVEMMAPVSKSCRDTSSDETTYLVTFPSFTVSRNDNKFVSVGCDTFGYLNSSYDGGRTYSTGCLSRCYGNMFDIVDESCSGFGCCQMDIPPNMVNISIQAASFDNFEESLSFNDCSYSFVVKNGNYTFYKKDLKKLRFDDVAVIYDWSIGNETCEASKNRGTNACKGNSKCVRFNANGYQCRCKFGFEGNPYHPDGCSDIDECKIGRHDCISDDNCHNMNGTYRCFCPKGQHGNGTKEGRCQENNALPKFVIGGGAGFIALFAVIFFLYWMYQKRKLSKLKEKFFKQNGGYILLQQISTRGESSQTVQLFTEDELKKATKNYDDKLIIGRGGYGTVFKGVLTNNRIVAIKKSKIVDESQIEQFINEVVVLSRINHRNVVKLLGCCLETEVPLLVYEFINNGTLFNFMHKGRNANNLVWETRLRIATEAAGALSYLHSAASIPIIHRDIKSANILLDSTYTAKVSDFGASRFVPQDQIALATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLAELLTGSDAIQDGILNEKNEQEIKEVAILAAKCLSLKGEDRPSMKEVAMELEGIRVLQKHPWSNNNGDNNLAETQCLVLDESSSRIHMHSERCSHQNYRYDSINDQLSSSLDGR 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03325 709 Pfam Protein kinase domain 405 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03325 709 SUPERFAMILY EGF/Laminin 281 316 - -
Aip06g03325 709 ProSitePatterns Protein kinases ATP-binding region signature. 410 433 IPR017441 GO:0005524
Aip06g03325 709 Gene3D Laminin 285 323 - -
Aip06g03325 709 ProSiteProfiles Protein kinase domain profile. 404 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03325 709 Gene3D Transferase(Phosphotransferase) domain 1 480 672 - -
Aip06g03325 709 SMART egf_5 284 324 IPR000742 -
Aip06g03325 709 SMART egf_5 235 280 IPR000742 -
Aip06g03325 709 SMART serkin_6 404 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03325 709 CDD STKc_IRAK 410 649 - -
Aip06g03325 709 SMART egfca_6 281 324 IPR001881 GO:0005509
Aip06g03325 709 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 298 309 IPR000152 -
Aip06g03325 709 Gene3D Laminin 233 284 - -
Aip06g03325 709 Gene3D Phosphorylase Kinase; domain 1 374 479 - -
Aip06g03325 709 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 605 672 IPR045274 GO:0007166
Aip06g03325 709 Pfam Wall-associated receptor kinase galacturonan-binding 25 85 IPR025287 GO:0030247
Aip06g03325 709 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 605 672 - -
Aip06g03325 709 ProSitePatterns Calcium-binding EGF-like domain signature. 281 307 IPR018097 GO:0005509
Aip06g03325 709 Pfam Calcium-binding EGF domain 281 323 IPR001881 GO:0005509
Aip06g03325 709 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 8 605 - -
Aip06g03325 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 525 537 IPR008271 GO:0004672|GO:0006468
Aip06g03325 709 SUPERFAMILY Protein kinase-like (PK-like) 384 653 IPR011009 -
Aip06g03325 709 ProSiteProfiles EGF-like domain profile. 281 324 IPR000742 -
Aip06g03325 709 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 8 605 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03325 Aip-Chr6 129854828 129857904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03325 20 659 Receptor kinase-like Gene Family AT1G21230 46.334 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Aip06g03325 Pkinase 7.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03325 - - adu:107495457 855.129