Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03321 ATGACGTTGAAGGCCACAGTAGTACTACTCTTAATAGTTGTTGCACTAGTCCTTCTAGCAACAATTGCAGCAGATGATGGAAATAATCAAACCCTTGAAGGATGCAGAAGCGACTGTGGTGGTGTCCGAGTTCCATATCCATTTGGCATAGGGAACTCATCATCCGTCCCCCATAAAAGCTGTTTCTTGCAAAGTTCGTTTGAGCTGACATGCCCAAATTCAACTTTATACTGGGGAAATATCAAAGTCTTAGACATAAAAATTTCCCAGGCTAAAGTTGACATGTCGATTCCTATCTCAAGGATTTGTCGTGACGGTCATTATTATAGAGGAGTTTCCATAGATATTCCTTCTTTCACCATTTCTAGTGAAGACAACAAGTTCGTTAGTGTAGGTTGCGACACCTATGGCTATCTTCACAGCTCCTACAAAGACGACGATAATGCAACATATTCAACAGGGTGCATAACAAGATGTTATGGCAGTTCTATGGAAGTTGAGGATGGACATTGTTCTGGGATTGGGTGTTGTCAGGTGGATATTCCGCCTAAAATGAGGATGACCTTTGTCAAGTCATTTTCCTTTTACAATTTCAGCCAAACTTGGAGATTCAACAACTGCAGCTATTCTTTTGTTGTCAAAAAAGAAAACTACACATTTTACAGGGAACACTTGAGAAACCTGCCTTTTGAGGAATTCCCTGTGGTGTTTGATTGGAGTGTTGGAGATGAAACACGTGAAGCTTCTCGGAAAAGAGGTACCAGTTACGCTTGCAAGGGAAACACCACTCGTAATGACTCTGTCCCTACTGGATATGGTTACATATGCCAATGCAATAAAGGTTTTGAAGGAAATCCTTACCACCCTCTTGGCTGCATAGACATTGATGAATGCAAGACAGGACAACATTCATGTGTAAGTGACCATAATTGTCACAATACAAATGGATCCTACACATGCTTCTGTCCTAAGGGGCAATCTGGAAATGGTACCAAGGAAGATGGTTGCCACAAGAAAAATTTCCTTCCACATATTGTCATTGGTACAAGTGCAGGATTCATAGCTATTTTCGTAGGGACTTGTTTGCTATACTTAGCGCACCAAAAGAAAAAACTCATCAAACTGAAGGAAAAGTTTTTTGAGCAAAACGGCGGTCATATTTTAGTACAACAAGGAGAAGAGTCATCCCATGTTAAAATTTTCACTGCTGACAAATTAAAGAAAGCCACTAACAACTATGACGAGAAGTTAATCATTGGCAGGGGAGGTTATGGCACGGTTTTCAAAGGAGTTCTAGAGAATAACACAATTGTTGCTATCAAGAAGTCCAAAATAGTTGATCCTGGCCAAGTTATGCAATTCATCAATGAGGTGATTGTTGTCTCTAAAATTAACCACAGAAATGTGGTGAAGCTTTTGGGTTGTTGTTTAGAAACAGAAGTTCCTCTGCTAGTCTATGAGTTTGTAAGCAATGGTACACTCTTTGATTTCATCCATAATGAAAAGAAGAGAAATCATTTTAACTGGAAAAATCGTCTCAGAATTGCAGCAGAGGCGGCTGGAGCTTTATCATATCTTCACTCATCTGCTTCCATTCCAATTGTCCACAGAGATGTTAAAAGTGCTAATATTCTCTTAGACGAAGACTACACTGCTAAAGTCTCTGACTTTGGAACTTCTAGATTTGTTCCATTGGATCAAACTGCACTAGCTACAATGGTGCAAGGAACTTTTGGTTACTTGGATCCAGAGTACATGCAAACTAGCCAATTAACTGAGAAAAGCGATGTGTATAGTTTTGGTGTTGTGCTGGCTGAGCTTCTTACAGGAAAGAAACCTCTTTTGTTGGGGAAGTCGAAAGAGAAAACAAATATTTCTATCTACTTTCTATCTTGCCTAGAAGAGAATTGCTTGTTTGAAACTCTTCAAGATGGAATCTTGAATGAAGAAAACAAGCAAGAGATTGTGGAAGTTGCTAATATTACAGCAAAGTGTTTGAGACTTAAAGGAGAAGAAAGACCAAACATGAAGGAAGTGGCAATGGAATTGGAGGGAATAAGGAGAATGTCAAAGCATCAGTGGGTTAACAATGGAGACAAAAATTTTGAAGAGACGCAGCACTTACTTCCTATATCATCATCGTCGTCGAAAGGATATGAGTATGGTGATAGCAGTAGTAGTAGTCATCAAAATATAAATTATGATAGTATCATCAGGGATCAAGAAGGGGCAATTGCTTTAGCAGATGGAAGGTGA 2256 0.3936 MTLKATVVLLLIVVALVLLATIAADDGNNQTLEGCRSDCGGVRVPYPFGIGNSSSVPHKSCFLQSSFELTCPNSTLYWGNIKVLDIKISQAKVDMSIPISRICRDGHYYRGVSIDIPSFTISSEDNKFVSVGCDTYGYLHSSYKDDDNATYSTGCITRCYGSSMEVEDGHCSGIGCCQVDIPPKMRMTFVKSFSFYNFSQTWRFNNCSYSFVVKKENYTFYREHLRNLPFEEFPVVFDWSVGDETREASRKRGTSYACKGNTTRNDSVPTGYGYICQCNKGFEGNPYHPLGCIDIDECKTGQHSCVSDHNCHNTNGSYTCFCPKGQSGNGTKEDGCHKKNFLPHIVIGTSAGFIAIFVGTCLLYLAHQKKKLIKLKEKFFEQNGGHILVQQGEESSHVKIFTADKLKKATNNYDEKLIIGRGGYGTVFKGVLENNTIVAIKKSKIVDPGQVMQFINEVIVVSKINHRNVVKLLGCCLETEVPLLVYEFVSNGTLFDFIHNEKKRNHFNWKNRLRIAAEAAGALSYLHSSASIPIVHRDVKSANILLDEDYTAKVSDFGTSRFVPLDQTALATMVQGTFGYLDPEYMQTSQLTEKSDVYSFGVVLAELLTGKKPLLLGKSKEKTNISIYFLSCLEENCLFETLQDGILNEENKQEIVEVANITAKCLRLKGEERPNMKEVAMELEGIRRMSKHQWVNNGDKNFEETQHLLPISSSSSKGYEYGDSSSSSHQNINYDSIIRDQEGAIALADGR 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03321 751 SUPERFAMILY EGF/Laminin 288 327 - -
Aip06g03321 751 SUPERFAMILY Protein kinase-like (PK-like) 399 704 IPR011009 -
Aip06g03321 751 ProSitePatterns Calcium-binding EGF-like domain signature. 294 320 IPR018097 GO:0005509
Aip06g03321 751 Gene3D Phosphorylase Kinase; domain 1 388 488 - -
Aip06g03321 751 ProSitePatterns Protein kinases ATP-binding region signature. 419 442 IPR017441 GO:0005524
Aip06g03321 751 CDD STKc_IRAK 419 686 - -
Aip06g03321 751 Pfam Protein kinase domain 414 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03321 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 15 712 IPR045274 GO:0007166
Aip06g03321 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Aip06g03321 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 15 712 - -
Aip06g03321 751 Pfam Calcium-binding EGF domain 294 336 IPR001881 GO:0005509
Aip06g03321 751 Pfam Wall-associated receptor kinase galacturonan-binding 35 92 IPR025287 GO:0030247
Aip06g03321 751 Gene3D Transferase(Phosphotransferase) domain 1 489 709 - -
Aip06g03321 751 ProSiteProfiles EGF-like domain profile. 294 337 IPR000742 -
Aip06g03321 751 ProSiteProfiles Protein kinase domain profile. 413 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03321 751 CDD EGF_CA 294 328 - -
Aip06g03321 751 Gene3D Laminin 250 336 - -
Aip06g03321 751 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 311 322 IPR000152 -
Aip06g03321 751 SMART serkin_6 413 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03321 751 SMART egfca_6 294 337 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03321 Aip-Chr6 129788551 129792363 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03321 30 737 Receptor kinase-like Gene Family AT1G21230 44.762 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Aip06g03321 Pkinase 6.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03321 - - adu:107495457 886.33