Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03320 ATGGTACCAAAACGGTTGCCACAAGAAAAATTTGCTTCCACGTATTATTATTGGTGCAAGTGCAGGATTCATGGCTATTTTGGTGGGGACTTGTTTGTTATACCTAAGGAAAGATGGGTTACTGAGAAAAGCGACGTGTATAGCTTTGGCGTTGTGCTGGCAGAGCTTCTTACAGGAGAGAAAGCTCTTTCATTTGCGAGGTCGGAAGAGAAAGCAAATCTTGCTATCTACTTTCTATCTTGCCTGAAAGAGAATTGCTTGTTTGAAGCTCTTCAAGTTGGAATCTTGAATGAAGATAACAAGCAAGAGATTATAGAAGTTGCTAATATTACAGCAAAGTGTTTGAGTCTTAAAGGGGAAGAAAGACCATACATGAAGGAAGTGGCAGTGAAATTGGAAGGAATAAGGGAAATGTCACAGCAACAATGGGTCAATAATGCCGACAACAATTTTGAAGAGACCCAATCGCCAGAAAGACATGATAGTATTGCCAATGATGAAGAAGCCTTATTGTCTTTAGCATATGGAAGGTGA 534 0.3989 MVPKRLPQEKFASTYYYWCKCRIHGYFGGDLFVIPKERWVTEKSDVYSFGVVLAELLTGEKALSFARSEEKANLAIYFLSCLKENCLFEALQVGILNEDNKQEIIEVANITAKCLSLKGEERPYMKEVAVKLEGIREMSQQQWVNNADNNFEETQSPERHDSIANDEEALLSLAYGR 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03320 177 Gene3D Transferase(Phosphotransferase) domain 1 15 161 - -
Aip06g03320 177 PANTHER NON-FUNCTIONAL PSEUDOKINASE ZED1-LIKE 40 151 - -
Aip06g03320 177 SUPERFAMILY Protein kinase-like (PK-like) 38 140 IPR011009 -
Aip06g03320 177 Pfam Protein tyrosine and serine/threonine kinase 37 131 IPR001245 GO:0004672|GO:0006468
Aip06g03320 177 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 40 151 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03320 Aip-Chr6 129780342 129781280 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03320 29 177 Receptor kinase-like Gene Family AT1G21240 44.578 9.41e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Aip06g03320 PK_Tyr_Ser-Thr 1.4e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03320 - - ahf:112757813 241.891