Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03312 ATGAAACCACTTGAAGGGATAAGTGATGATGTCAAAGGAAGACTTGCATGCTATAAAGAAGATTGGACAAAGGGATTTAAATCTGGCTTTAGGATATTTGCTCCAACTTTCTACATATTTTTTGCTTCTGCTATCCCCGTAATTGCTTTTGGGGAACAACTTAATAAGGAAACAAATGGGAGCTTGGGGATAGTGGAATCATTAATATCTACGGGGCTTTGTGGAATTATCCACTCAATATTTGGTGGTCAGCCATTGTTGATTGTTGGTGTTGCTGAACCCACCATTATAATGTATCATATTATGTTTCAGTTTTGCGCATCAAAACCAGATTTCGGTGCCAAACTCTTTTTGCCTTGGGCTGCTTGGGTTTGTGTGTGGACAGCATTATTTCTAATTGTGCTTGCAATTTTCAATGCATGCACAGTTATCTCAAGGTTCACAAGAATTTGCGAGGAATTATTCGGAATGCTAATCACTGTCCTTTTCGTTCAACAAGCTGTAAAGGGTGTGTTGTACGAATTCCTTCCAGCTGAGGGCGGAGATGGAAACTCAGAGGATTCAAAATTCCAATGGAGATACATAAATGGCTTACTGGCTGTGATATTCTCTTTTGGGTTACTTCTGAGTGCGAAGCAAAGTAGAAAAGCAAGACATTGGCGATATGGGACAGGGTGGCTAAGAGCTTTAATAGCAGATTATGGGGTTCCATTGATGGTGGTGTTTTGGACTGCATTATCGTACACAAAACCAAGCAAAGTTCCATCTCAAGTTCCTCGCAGGTTGTTTTGTCCACTGCCCTGGCAATCTGAATCTCTCTACCACTGGACAGTAGTGAAGGACATGGGCAAGGTACCCATCTTTTATATTGTGGCGGCGGTTATACCTGCTCTCATGGTTGCTGCTTTATACTTTTTTGATCATAGTGTTGCTTCCAAGATGGCTCAGCAAAAGGAATTTAACCTTCAAAAACCTTCTGCTTACCACTATGATCTTTTCTTGCTTGGACTCATGACTCTACTTTGTGGTGTTCTTGGGCTTCCTCCATCAAATGGAGTCCTTCCTCAATCACCAATGCATACAAAGAGTCTTGCAGTTCTTAATAGGCAGATTATCCGAAAGAAGATGGAGAAGAAAGCGAAAGAAGTGCTTAAGAAACAAGGGAGCCACGCAGAATTATTCGGCAGGATGCAATCTGTGATTATAGAAATGGATGCAGATCCTACTTTTAAAGAAATGGAGAAATTGAAAAAGGCAGTGATGAAATCTGAGGATGAGAAGGAAGGTGAAAAAAATGTAGAAAGTTTTGATATGAAACAAATAGAGGAACATCTACCTGTGCGTGTTAATGAGCAAAGGCTTAGCAACTTGTTGCAGTCTCTTATGGTTGGGTTATCAGTTTTGATGATCCCCATCATAAGAAAAATACCTACATCAGTTTTGTGGGGATATTTTGCTTTCATGGCCATTGATAGTCTCCCTGGCAATCAATTCTGGGAAAGGTTCTTGCTACTCTTTATCCCAAAAAGTCGCCGCTACAAAATTTTGGAAGGTCCACATGCAAGTTTTGTGGAGCTGGTACCATTCAAGGTGACAGCATTATTCACAGGGTTGCAATTGGTGTATTTCTTGATTTGTTACGGGATGACGTGGATACCAACGGGAGGAATACTGTTCCCTTTGCCTTTCTTCCTTCTCATACTCATTAGAGAGCATCTCCTTCCTAAGTTCTTCAAAGCCCAACATCTTCATGAACTTGATGCTTCTGAGTACGAGGAAGTTGCTGGTGATCCTACTGTTTCTCAAATGATACCACTCATGATGGATAACGAGCAGGGTAACACGGATGATGAGGATGATAAGTTAGGTTTGGGTGCAGAGATATTGGATGAGATGACTACTCACAGAGGAGAGTTGAAACATAGAACTCTAACAAGATTAGATAGAGAATCCCATTCTCATTCTGAAGAACCTCCTCATCAACAATAA 1989 0.4087 MKPLEGISDDVKGRLACYKEDWTKGFKSGFRIFAPTFYIFFASAIPVIAFGEQLNKETNGSLGIVESLISTGLCGIIHSIFGGQPLLIVGVAEPTIIMYHIMFQFCASKPDFGAKLFLPWAAWVCVWTALFLIVLAIFNACTVISRFTRICEELFGMLITVLFVQQAVKGVLYEFLPAEGGDGNSEDSKFQWRYINGLLAVIFSFGLLLSAKQSRKARHWRYGTGWLRALIADYGVPLMVVFWTALSYTKPSKVPSQVPRRLFCPLPWQSESLYHWTVVKDMGKVPIFYIVAAVIPALMVAALYFFDHSVASKMAQQKEFNLQKPSAYHYDLFLLGLMTLLCGVLGLPPSNGVLPQSPMHTKSLAVLNRQIIRKKMEKKAKEVLKKQGSHAELFGRMQSVIIEMDADPTFKEMEKLKKAVMKSEDEKEGEKNVESFDMKQIEEHLPVRVNEQRLSNLLQSLMVGLSVLMIPIIRKIPTSVLWGYFAFMAIDSLPGNQFWERFLLLFIPKSRRYKILEGPHASFVELVPFKVTALFTGLQLVYFLICYGMTWIPTGGILFPLPFFLLILIREHLLPKFFKAQHLHELDASEYEEVAGDPTVSQMIPLMMDNEQGNTDDEDDKLGLGAEILDEMTTHRGELKHRTLTRLDRESHSHSEEPPHQQ 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03312 662 Pfam HCO3- transporter family 3 174 IPR011531 GO:0006820|GO:0016021
Aip06g03312 662 Pfam HCO3- transporter family 446 537 IPR011531 GO:0006820|GO:0016021
Aip06g03312 662 Pfam HCO3- transporter family 196 371 IPR011531 GO:0006820|GO:0016021
Aip06g03312 662 PANTHER ANION EXCHANGE PROTEIN 2 655 IPR003020 GO:0005452|GO:0006820|GO:0016020
Aip06g03312 662 Coils Coil 413 433 - -
Aip06g03312 662 PANTHER BORON TRANSPORTER 6-RELATED 2 655 - -
Aip06g03312 662 Gene3D Helical hairpin bin 14 56 - -
Aip06g03312 662 MobiDBLite consensus disorder prediction 635 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03312 Aip-Chr6 129648400 129651781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03312 3 657 Antiporters AT5G25430 62.935 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03312 K24194 - aip:107647497 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03312 06 129648400 129651781 Aip06g03312 06 129648400 129651781 ECH
Aip06g03312 06 129648400 129651781 Aip08g00105 08 589198 591414 ECH
Aip06g03312 06 129648400 129651781 Aip08g03034 08 119554998 119558945 ECH
Aip06g03312 06 129648400 129651781 Aip08g03034 08 119554998 119558945 PCT