Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03262 ATGACTGCTTTCAACTCCTTCAGATCGTCCAAATTGGTCTCATGGAAACCTACCGGCAGGCTTCAGCAAACCCTAGCGAATTGCGTAGAGCGGAGGGGCAAGGCTTTGCATTCAGGAAAGGGTTCGACAGTGCGATTGTGCCCTGGGTTCGCCGGCGAAGGAAGGTACTTTGATTATCGGAGCAATTTGATTCCGGCATCTATTGATTTTGTTCAGGTGTCGCCTCTCTGTACCACTCTCTGTAAAGATGGTTTCCGTGTTCGAACCGTAGAGCACTTACTTTCTGCATTGGAGGCTGCTGGAGTTGATAATTGCATAATTGAGATTGAGAATTTGGATGCTGAAGAGCGTGATGCTGAGATTCCTATATTTGATGGATCAGCAAGAGAATGGGTTGAAGCAGTGGATGAAGTTGGTTTAAAGGTGGCAACAACCCGGGATGGCAAACATTGTGAGAAAATGGCAGCACATGTGAATGAACCGGTGTATGTTTGGAGGGATGATTCTTTTGTTTCTGCATTTCCTTCAAACGTGGTTAAGATAAGTTATGGCATCAGCTTTCCACAGGCACCAGCTATAGGCTCCCAGTGGTTTTCTACACCATCTGTGGACAATTTGTTTTATACCAGACAGATCGCTTTGGCAAGAACCTTCTGTATTTATGAGGAGATCGAGGAAATGCGCAATGTTGGACTTATCAAGGGGGGTTCTCTGGAAAATGCCATTGTATGCTGTACCAGTAAAGGTTGGTTGAACCCACCTCTGCGTTTTAATGATGAACCATGCCGCCACAAGGTCTTAGATCTTATTGGTGATCTTTCACTTTTTGCTCAGTTTGGGAATCAAGGACTTCCAGTGGCACACATTGTAGCTTACAAGGGTGGCCATGCTTTGCATGCTGGTTTGGCACGCCAGTTAATGGGTGAGTGA 930 0.4591 MTAFNSFRSSKLVSWKPTGRLQQTLANCVERRGKALHSGKGSTVRLCPGFAGEGRYFDYRSNLIPASIDFVQVSPLCTTLCKDGFRVRTVEHLLSALEAAGVDNCIIEIENLDAEERDAEIPIFDGSAREWVEAVDEVGLKVATTRDGKHCEKMAAHVNEPVYVWRDDSFVSAFPSNVVKISYGISFPQAPAIGSQWFSTPSVDNLFYTRQIALARTFCIYEEIEEMRNVGLIKGGSLENAIVCCTSKGWLNPPLRFNDEPCRHKVLDLIGDLSLFAQFGNQGLPVAHIVAYKGGHALHAGLARQLMGE 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03262 309 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 2 307 IPR004463 GO:0008759|GO:0009245
Aip06g03262 309 Gene3D lpxc deacetylase, domain 1 20 147 IPR015870 GO:0008759|GO:0009245
Aip06g03262 309 Gene3D lpxc deacetylase, domain 2 156 309 IPR011334 GO:0008759|GO:0009245
Aip06g03262 309 TIGRFAM lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 22 307 IPR004463 GO:0008759|GO:0009245
Aip06g03262 309 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 22 307 IPR004463 GO:0008759|GO:0009245
Aip06g03262 309 SUPERFAMILY Ribosomal protein S5 domain 2-like 21 141 IPR020568 -
Aip06g03262 309 SUPERFAMILY Ribosomal protein S5 domain 2-like 160 307 IPR020568 -
Aip06g03262 309 Hamap UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 20 309 IPR004463 GO:0008759|GO:0009245
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03262 4 306 Carbohydrate Esterase AT1G25054 62.706 1.37e-142 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03262 K02535 - gmx:100814465 501.13