Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03249 ATGGCGGTGTTGAAGCGCCTTGAGGAGGCACTGAGGTTCTTGGGAGAGAATTGTGGGTTGGCAATTCAATGGCTGGAGGATATAGTGGAGTATTTGGAGGATAACACGGTTGCGGACGAGAGGTATCTCGCGAATTTGAAGAAGGCGTTGAAGAATCTTAGGGAGTTGCAGAATGATGAGGAGAAGGCGCGGCTTGATGGCGGGCTTTTGGAAGCTGCATTGGATAAATTGGAGAATGAGTTCCGCCAGCTCTTGACTGAGAATAGTGTGCCGCTTCCAATGGCGGCTGCGCTTGGTGATCAAGCGTGCATTGCACCATCGCCTTTGCCAGTATCTGTTATTCACAAGTTGCAAGCTATTCTTGGTAGACTGAAAGCTAATAATAGACTTGAGAAGTGCATATCGATTTATGTTGAAGTCCGTAGTTCTAATGTGAGAGCCAGTTTGCAGGCTCTCAATTTGGATTACCTTGAAATTTCGGTGTCTGAATTCAATGATGTGCAGAGCATAGAGGGGTATATAGGGCAATGGGGAAAACATTTAGAATTTGCAGTGAAACATTTGTTCGAGGCCGAGTATAAGCTTTGTAATGATGTATATGAGAGGATGGGGCTCGATGTTTGGATGGGTTGTTTTTCGAGGATAGCTGCGCAGGCTGGTATACTAGCATTTCTTCAATTTGGGAAGACTGTCACGGAGAGTAAGAAAGACCCCATTAAACTTTTGAAGTTGTTGGATATTTTTGCGTCTTTGAACAAGTTGAGGCTTGATTTCAACCGTCTATTTGGAGGAGCAGCATGTGCTGAAATCCAGAATTTGACTAGGGATCTTATTAAGAGTGTCATTGATGGTGCGGCAGAGATTTTCTGGGAACTTCTGCTACAGGTGGAGTTGCAGAGGCAGAGTCCACCCCCTCTAGACGGCAATGTTCCGAGATTGGTCTTGATCATTCACCGAAGTTGGAAGCGTCAGAGCTTTCAGGAGAAACTTCTTGTTACTGAAATTTTGAACATTGTGAAAGCTGTTGAACTGAATTTGGAGACATGGATCAAGGCTTATGAAGATCCTATGTTGACGAACTTCTTCGCTATGAACAATCACTGGCACCTTTACAAACATTTGAAAGGGACCAAGCTTGGGGATCTCTTGGGAGATTCTTGGTTAAGGGAACATGAAAATTACAAAGAATATTACTCGACAATCTTCTTGCGAGAGAGCTGGGGAAAGCTTCCTTCACACTTGAGTAGAGAAGGGCTGATTCTCTTCTCCGGAGGGCGGGCTACTGCTCGTGATCTGGTCAAGAAAAGGTTAAAAAAGTTCAATGAAGTTTTCGATGAGATGTATGGGAAGCAGTCAGGTTGGGTCATGCCGGAGCGAGATCTGAGGGAGAAGACATGTCAGCTTATAGTGCAAGCTGTGGTCCCTGTTTACCGGAGTTACATGCAGAATTACGGCCCCTTGGTCGAGCAAGAAGCTAGCTCCACAAAATATGCAAAATACACAGTGCAGAAGCTGGAGGAGATGCTTTCATGTCTTTATCGGCCAAAGCCTGTGAGACATGCCAGTTTGAGGGGTCGGCAGTTCAGCGGAAAATACGGCAATGGAATGCCAGATCTTCGTCGTACAGCTTCTGCAGTTGTGTAG 1644 0.455 MAVLKRLEEALRFLGENCGLAIQWLEDIVEYLEDNTVADERYLANLKKALKNLRELQNDEEKARLDGGLLEAALDKLENEFRQLLTENSVPLPMAAALGDQACIAPSPLPVSVIHKLQAILGRLKANNRLEKCISIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEGYIGQWGKHLEFAVKHLFEAEYKLCNDVYERMGLDVWMGCFSRIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGAACAEIQNLTRDLIKSVIDGAAEIFWELLLQVELQRQSPPPLDGNVPRLVLIIHRSWKRQSFQEKLLVTEILNIVKAVELNLETWIKAYEDPMLTNFFAMNNHWHLYKHLKGTKLGDLLGDSWLREHENYKEYYSTIFLRESWGKLPSHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYGKQSGWVMPERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQEASSTKYAKYTVQKLEEMLSCLYRPKPVRHASLRGRQFSGKYGNGMPDLRRTASAVV 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03249 547 SUPERFAMILY Cullin repeat-like 2 513 IPR016159 -
Aip06g03249 547 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 5 314 - -
Aip06g03249 547 Gene3D Exocyst complex component Exo70 29 521 - -
Aip06g03249 547 PANTHER EXOCYST COMPLEX PROTEIN EXO70 314 531 IPR004140 GO:0000145|GO:0006887
Aip06g03249 547 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 314 531 - -
Aip06g03249 547 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 314 IPR004140 GO:0000145|GO:0006887
Aip06g03249 547 Pfam Exo70 exocyst complex subunit 325 510 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aip06g03249 547 Pfam Exo70 exocyst complex subunit 176 314 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aip06g03249 547 Coils Coil 39 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03249 Aip-Chr6 128712737 128715387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03249 1 547 EXO70 exocyst subunit family AT4G31540 72.712 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03249 K07195 - gmx:100796139 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03249 06 128712737 128715387 Aip06g03249 06 128712737 128715387 ECH