Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03222 ATGGACCCCAAATCTTGCGGCGTTATGTCAGCACCGTCGTTATTATCCGGCGACTACTGTGACTTCCGCCGTGCTCCGACGGAGCTCGATCTGGAAGATGTGGTGGTGACTACATTTTCGACCTGTACTAGTGGAGTGACAGATAATAATAACAATATTAATTATAATAATAGTACTCAACAACAGCAGCAGCAGCTTGTGTGCTCTCAGAACCTGACTCGCAACCATTCAACTATTGATTCTCAATCATCCATTTGTGGTACAGCTACTGTTGGAAGCCCAGTGTCTGCTAATAAACCAAACGGCGGCAGAGGAAGCGAAGGCAAAGGAGGGACCACGTGCGGTTCCTCATCACGTGAGGCGTCCGATGAGGATGATGAGGCAGGTCCATGTGAAGAAAGCACAAACCCTATTGATATGAAGCGCCTCAGAAGGAAGGTTTCTAATCGCGAGTCTGCTAGGAGGTCTAGAAGAAGGAAGCAAGCTTATTTGACTGACCTTGAGTCTCAGGTTGAACAGCTGAGGCTGGAAAATGCAACCCTGTACAAACAGCTTACAGATGCTAGCCAACATTTTCGTGATGCTGATACAAATAACCGAGTTCTTAAATCAGATGTTGAAGCTCTGAGAGCTAAGGTGAAATTAGCGGAGGACATGGTTGCTCGAAGCTCTTTCACTAATCTGAACAACCAGCTAATCCAGAATCAGCGGGGTCAGATGAACACCAACAATAATAATTTGCGGCGCGTGGCACATGTTTCGCCAACGATTACTGTCCATGGAAATGACTCCTCATATGGAAGCTGCATCACTAGTGTTGATGGACAAAACTCAGCCCATCTTGGAGGACTTGCCAGAAACTTGGACATAACTAATAATAATAATAATAATAACAACTATAGTGATTATAATGCAGTCATAAGCGATGCTGTAAGCTCTGTCACTAACTTATGGCCATGA 960 0.45 MDPKSCGVMSAPSLLSGDYCDFRRAPTELDLEDVVVTTFSTCTSGVTDNNNNINYNNSTQQQQQQLVCSQNLTRNHSTIDSQSSICGTATVGSPVSANKPNGGRGSEGKGGTTCGSSSREASDEDDEAGPCEESTNPIDMKRLRRKVSNRESARRSRRRKQAYLTDLESQVEQLRLENATLYKQLTDASQHFRDADTNNRVLKSDVEALRAKVKLAEDMVARSSFTNLNNQLIQNQRGQMNTNNNNLRRVAHVSPTITVHGNDSSYGSCITSVDGQNSAHLGGLARNLDITNNNNNNNNYSDYNAVISDAVSSVTNLWP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03222 319 Pfam bZIP transcription factor 140 187 IPR004827 GO:0003700|GO:0006355
Aip06g03222 319 Coils Coil 157 184 - -
Aip06g03222 319 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 144 159 IPR004827 GO:0003700|GO:0006355
Aip06g03222 319 Gene3D - 140 195 - -
Aip06g03222 319 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 139 202 IPR004827 GO:0003700|GO:0006355
Aip06g03222 319 SUPERFAMILY Leucine zipper domain 141 190 IPR046347 GO:0003700|GO:0006355
Aip06g03222 319 MobiDBLite consensus disorder prediction 91 161 - -
Aip06g03222 319 Coils Coil 199 219 - -
Aip06g03222 319 SMART brlzneu 137 201 IPR004827 GO:0003700|GO:0006355
Aip06g03222 319 PANTHER BASIC LEUCINE ZIPPER 63 64 319 - -
Aip06g03222 319 PANTHER BZIP TRANSCRIPTION FACTOR 64 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03222 Aip-Chr6 128259647 128264703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03222 22 319 bZIP Transcription Factor Family AT5G24800 43.234 4.06e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip06g03222 bZIP_1 5.4e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03222 K25784 - gmx:778193 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02741 10 118542813 118546614 Aip06g03222 06 128259647 128264703 PCT