Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03211 ATGAATGGTGACCGGAAAATCCCTGTTTCTCCATCGAAGGAACAGATTGATGGTGCTCAGAAGATTAGAGCATTGCATGGGAGGACTACTGGTCCAACAAGGCGTTCTACAAAAGGGAATTGGACACCTGAACAGGATGAGATCTTGCGGAAGGCTGTTCAGCATTTCAAAGGAAAGAATTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACTGATGTACAATGCCTACATAGGTGGCAGAAAGTCTTAAATCCTGAACTTGTCAAGGGCCCATGGTCTAAGGAGGAAGATGAAGTAATTATTGAATTGGTGAATAAATATGGACCTAAAAAATGGTCTACTATTGCTCATCATTTACCAGGACGCATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTGGTATAAACAAGGAAGCATGGACACAGGAAGAGGAGTTGACCTTAATCCGTGCTCATCAAATTTATGGAAACAAATGGGCTGAATTAACGAAGTTCTTGCCTGGGAGGACAGATAATTCTATTAAGAACCATTGGCACAGTTCTGTCAAAAAGAAATTGGATTCTTACTTGGCATCAGGGTTGCTTGCTCAGTTTCAATCTGCACCACTTGCTGGAAATCCTGATCAACAGATGGTTTTAACTTCAGAGATGCACTCCGTTGGAGATGGTAATGGTCCTAAGAGGACTGATAGAGAGGATGTTTCAGAGTGTAGCCAAGAATCAGCTGATTCTGCTGGATTGACTAGTAATGTTGATCTACAAACTCGAGAGGTGTATAAGCCAGAGGAAGAATCTATTCTAGGAAAGGATCATAATCTGAGTCAAGCATCGTGTCCACAGCATTACTACATATCTCTTGATGATGTGGATATCTGCATCCCAGAAGTTGCTTGCCAAGATGCTTGCTGTTCTCAATTTGCTGAGCAGATATGCTCACACAAATCTGGAAATGCCCTAACTGGGGATTACCAGTTTAATTGTGTGGATAATAGTGAAATGTGTAACATGGTAAATGTTCCCTTTCAGACTGAGGGGTTAGGTATTTCAACTTTGATGAGACCTGCATCTATGGATCCTGCTAAGCCAAATAACATGTCAATATCTGAGGATGAATGTTGCAGATTCCTATTTTCGGAGGCAGTTAGTGATGGATGCTTTTCTCCCAGAGTTTATATTAAAGACATGGACATGGTTGATTTTTCTGGATGCAATATGTTTCTATGTCAATCATGTCATATACAGATACCTTCTCCTCGTGAATCATCTTCGACTTCACAGCTTACTTGTCCAAAGTGTTCTAACAACTTTAAAGGAAGTTCATCTTCTCAATCTTTCCCACCAGTATTTTCTGCTAATAGTGAAGTAAAGCAAGAGCAACCAGAAACTCCGAAGGATTCTTCAAAATTGGTCCCTGTAAATAGTTTTGGTTATGGATCAAATTCTAAGGTAACTTGTTATGCAAAATATGGGAAGTTGAATGAGCATTCAAAAAAGGAAGATACAGGAACTTTATGCTACCAACCGCCCTGTTTTCCAAGCTTGGATATTCCTTTTCTAAGCTGTGATCTTGCACAATCTGAGCCTGATATGCAGCAAGAATTTAGTCCCCTTGGTATCCGCCAGCTTCTGATGTCTCCTGTAACCTGTCTAACTCCTTTCAGGTTGTGGGACTCACCCTCTGGTGGTGATAATCTAGATGCCTTGTTTAAAAGTGCAGCCAAAACTTTTACTGGTACACCATCCATATTAAGTAAACGACACCGAGATTTGTTATCACCACTTTCAGATAAAAGAACTGACAAGAAACTTGTGACAGACATGCCATCCAGCTTGATAAAAAGCTTTTCCAGCTTGGACTTTATGTTTGATGACAATGAGAATCGGGAGGCAGATATGATTTCTCCGACTTCATTACAAAAATGGAGCATTGCTGTGTCTGTTGATGATGATAAAGAAAATTGTGGTCAAACTGTTAAAGATAAACAAGTAGAAGAGAAAAATAATTCTGCCATTTCGGATGAAAAGAACAGAGAAAATGGGACTGTCAAAAATAGCTCTCAGGATAGCCTTAAGCATCAAGTTGATTCAAAGATGAAGAAGATTGATATTGACACTGATAATGATGATGATAATGATAATGATAATGTTGAACAGCCTTCTGGAATTTTGGTTGAACGTAATATGAATGATATAGCACCAAATTCTCCTGGATCAGACACAGTTCTAGGTTCAAGTGCTCGAACTCCCAAGAACTTGAGCAATAGGAGGTTGGAAGCAATTCCGAATCAGCGCAGTCCATGCTCAAGGGTCAAGTGTGTCCGGGCAAAGGAGCATGAAAAGCTTTCAGTTGATGTCACTTGTGTAGGGACGACTTCAGGGAAACAAGCCAAAAATGATGGTGGTTTTGAAACAAGTAGCATATTTGGTGACACACCTTTTATGAAAAGCATTAAATCACCTTCTGCATGGAAATCTCCATGGTTCATCAACGCAACATTTCTGTGCAGCCCCAGGATTGCTACTGAAATTTCAATTGAGGATTATGGGTACTTAATGAGCTCAGGCAATAGAAGCTATGACGCCATCGGTCTGATGAAACAGATCAGTGAAAAAACTGCTGCTACATATGCTAATGCTCAAGAAGTTTTGGAAAATGAAACTCCTGAAGCATTGCCTAAAAATGCATCTTTAAATGACGAAGAAGGTGGTCAGGATGATAATCATCTGCAGAAACAGTCTGCTAAGCATTCTCAGGCAGCTTCAAATGCATTGATGGAACGACGCATACTTGACTTTAGTGAATGTGAAACAACACCAAGCAAAGagggaagacgcgccgttctacctagaggcgccacgggaagggtcgttgccgtcaagcccagccaccatcgccgccgttcgtgcctccgtttcgcgccgctagatctgtcaccgggagagaaacagaatgcgcgtggagagagaagTGGTCGCAGGGAGGTTCCACCGCCGTTGGAACTCCACTGCTGCTGCTGCCATGGCCGTCGCGCCTCTGCCGCCAAGAAACACCAAGGAGGGACCGTCCGCTGCTGCGTTGTTCCTGTCGCCATTCGGATGTACCTGAACCAAGTCGTCGTTGCCACCGGAGCTGAACTGTTCCTGTCATTATCACGATTTTCGGGACTATCGCCAGCTCCATTTtgtcgctactccggtccaaattctgcgctcattcgttttattttacttcaattctccttatcttga 3264 0.3873 MNGDRKIPVSPSKEQIDGAQKIRALHGRTTGPTRRSTKGNWTPEQDEILRKAVQHFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEVIIELVNKYGPKKWSTIAHHLPGRIGKQCRERWHNHLNPGINKEAWTQEEELTLIRAHQIYGNKWAELTKFLPGRTDNSIKNHWHSSVKKKLDSYLASGLLAQFQSAPLAGNPDQQMVLTSEMHSVGDGNGPKRTDREDVSECSQESADSAGLTSNVDLQTREVYKPEEESILGKDHNLSQASCPQHYYISLDDVDICIPEVACQDACCSQFAEQICSHKSGNALTGDYQFNCVDNSEMCNMVNVPFQTEGLGISTLMRPASMDPAKPNNMSISEDECCRFLFSEAVSDGCFSPRVYIKDMDMVDFSGCNMFLCQSCHIQIPSPRESSSTSQLTCPKCSNNFKGSSSSQSFPPVFSANSEVKQEQPETPKDSSKLVPVNSFGYGSNSKVTCYAKYGKLNEHSKKEDTGTLCYQPPCFPSLDIPFLSCDLAQSEPDMQQEFSPLGIRQLLMSPVTCLTPFRLWDSPSGGDNLDALFKSAAKTFTGTPSILSKRHRDLLSPLSDKRTDKKLVTDMPSSLIKSFSSLDFMFDDNENREADMISPTSLQKWSIAVSVDDDKENCGQTVKDKQVEEKNNSAISDEKNRENGTVKNSSQDSLKHQVDSKMKKIDIDTDNDDDNDNDNVEQPSGILVERNMNDIAPNSPGSDTVLGSSARTPKNLSNRRLEAIPNQRSPCSRVKCVRAKEHEKLSVDVTCVGTTSGKQAKNDGGFETSSIFGDTPFMKSIKSPSAWKSPWFINATFLCSPRIATEISIEDYGYLMSSGNRSYDAIGLMKQISEKTAATYANAQEVLENETPEALPKNASLNDEEGGQDDNHLQKQSAKHSQAASNALMERRILDFSECETTPSKEGRRAVLPRGATGRVVAVKPSHHRRRSCLRFAPLDLSPGEKQNARGERSGRREVPPPLELHCCCCHGRRASAAKKHQGGTVRCCVVPVAIRMYLNQVVVATGAELFLSLSRFSGLSPAPFCRYSGPNSALIRFILLQFSLS 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03211 1087 MobiDBLite consensus disorder prediction 1 42 - -
Aip06g03211 1087 Gene3D - 37 89 - -
Aip06g03211 1087 MobiDBLite consensus disorder prediction 228 243 - -
Aip06g03211 1087 MobiDBLite consensus disorder prediction 244 259 - -
Aip06g03211 1087 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 140 IPR017930 -
Aip06g03211 1087 MobiDBLite consensus disorder prediction 663 686 - -
Aip06g03211 1087 ProSiteProfiles Myb-like domain profile. 33 84 IPR001005 -
Aip06g03211 1087 SMART sant 37 86 IPR001005 -
Aip06g03211 1087 SMART sant 89 138 IPR001005 -
Aip06g03211 1087 SMART sant 141 189 IPR001005 -
Aip06g03211 1087 Gene3D - 90 141 - -
Aip06g03211 1087 CDD SANT 92 136 IPR001005 -
Aip06g03211 1087 MobiDBLite consensus disorder prediction 222 259 - -
Aip06g03211 1087 Gene3D - 143 202 - -
Aip06g03211 1087 Pfam Myb-like DNA-binding domain 90 136 IPR001005 -
Aip06g03211 1087 Pfam Myb-like DNA-binding domain 38 84 IPR001005 -
Aip06g03211 1087 Pfam Myb-like DNA-binding domain 142 184 IPR001005 -
Aip06g03211 1087 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 84 IPR017930 -
Aip06g03211 1087 PANTHER TRANSCRIPTION REPRESSOR MYB5 525 946 - -
Aip06g03211 1087 PANTHER TRANSCRIPTION REPRESSOR MYB5 10 253 - -
Aip06g03211 1087 PANTHER TRANSCRIPTION REPRESSOR MYB5 327 438 - -
Aip06g03211 1087 SUPERFAMILY Homeodomain-like 87 183 IPR009057 -
Aip06g03211 1087 ProSiteProfiles Myb-like domain profile. 85 136 IPR001005 -
Aip06g03211 1087 MobiDBLite consensus disorder prediction 888 926 - -
Aip06g03211 1087 MobiDBLite consensus disorder prediction 663 753 - -
Aip06g03211 1087 MobiDBLite consensus disorder prediction 695 711 - -
Aip06g03211 1087 MobiDBLite consensus disorder prediction 443 462 - -
Aip06g03211 1087 PANTHER MYB PROTEIN-RELATED 10 253 - -
Aip06g03211 1087 PANTHER MYB PROTEIN-RELATED 525 946 - -
Aip06g03211 1087 PANTHER MYB PROTEIN-RELATED 327 438 - -
Aip06g03211 1087 MobiDBLite consensus disorder prediction 736 753 - -
Aip06g03211 1087 MobiDBLite consensus disorder prediction 443 473 - -
Aip06g03211 1087 CDD SANT 40 84 IPR001005 -
Aip06g03211 1087 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 141 191 IPR017930 -
Aip06g03211 1087 SUPERFAMILY Homeodomain-like 36 91 IPR009057 -
Aip06g03211 1087 CDD SANT 144 184 IPR001005 -
Aip06g03211 1087 ProSiteProfiles Myb-like domain profile. 137 187 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03211 Aip-Chr6 128091453 128099110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03211 26 658 MYB Transcription Factor Family AT5G11510 45.958 1.06e-172 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aip06g03211 Myb_DNA-binding 8.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03211 - K09420 ahf:112755435 1873.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03211 06 128091453 128099110 Aip06g03211 06 128091453 128099110 ECH
Aip06g03211 06 128091453 128099110 Aip07g03402 07 123779512 123780558 PCT