Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03187 ATGGAGAGAGTCATCGGAGGGAAGTACAAAATTGGTCAGAAAATTGCAAGTGGCTCATTTGGTGAAATTCATATAGGGTCAAATATTGAGAATGCTGAAACTGTAGCAATTAAGATGGAGAATAGGAAAACCAAACAACCACAGCTACTTTATGAAGCTGAGCTATATAATCTTCTAAAAGGAGGAAGCGGTATTCCAAGAGTGAAATGGAGTGGCACTGATAAAGACAAGAATGTTCTAGTTCTTGACCTTTTAGGACCAAGTCTTGAAGACCTTTTTTACTATTGTGGCAAGAAATTTTCATTAAAAACCGTTTTGATGTTGGCTGATCAAATGCTTACAAGGATAGAGTATTTGCATTCCAAGGGCTTTTTGCATAGAGACATTAAGCCAGATAACTTCCTTATGGGTCTTGGCAAAAAAGCAAAGCaCATACAGGTTTATATGATTGATTTTGGACTTGCAAAGAGATACAGAGACCCTATCACAAATAAGCATATCCCTTGTAGGGAAAACAAACTTTTAATAGGGACTCCACGTTATGCTAGTCGCAATACTCATTCGGGATTTGAACAAAGTCGCCGGGATGATTTGGAGTCTCTTGGTTATGTTCTTATGTACTTTATAAGAGGAAGCCTTCCTTGGCAAGGTCTACAAGCTCCAACAAATAAACAAAAATACGACAAAATTTGTGAAATGAAGAAATCAATTCCAATTGATATACTTTGCAAGTCATGTCCTGTGCAGTTCGCATCATACTTTCGGTATTGCCATTCTTTGACTTTTGATCAACGACCAGATTATGGATTCTTGAAGCGCATGTTTCGTCATTTATTCAATGCTCAAGGATATGATGATTTATTTGACTGGACCATTCTAAAATATCAGCAAATGCGGCAGACAAAGACGTTAATTGAATCAAATCCTCCAATAATTGCTGTTCGTAGCAATCTACAACCAAAGGATGGTGACAACCAACAAGGAGTTAGTGATGTTACTCAAGATATTGTGGCAAAACCATCGATTAATACTGATAATCCTCATGTTAGCATAAACAGCAAGAAATCTAATGCTCAGAAATGTAACGACAAGGTTCCCATCGAAAAACATACAGAGAAGAATAGTGATTTATCTATTTCCAGCAGCATGCCCAGAGTTTTCATAGAAAATGTTTCAAAACTTAGAATTCCAGCAGAAGCCTCAAATCAGGGTTGTGTATCTGCCAATAATAACTATGCGCCGCCGACTGACACTGCATCTCCCTCATCACCTTTCAGCTCCCGACCCACCCCATTCTCAACTGAACATCCAGCCCCCATCGGAGTAGATTCCACCGCAGTCAACCAGCCTCTCTTGCATGCGCGTTTTAGCCTGCAGAACACGCCTCTCCTCCCTCACGCCGGCCTTCTTCCCATCGCGGGTCTCCATCTCATCTGTCGGTGTCGCAGTTCAAGCCCCGCCGTCGTCGTTTCGGTCGCGCGTTCTGGTGAGTGGCTCGACCCTCTCTCTAGCGGCAGCAACCATCCTTGTGGTCCCGTTCTGCCTCTGTCTCACCCTTGA 1560 0.4192 MERVIGGKYKIGQKIASGSFGEIHIGSNIENAETVAIKMENRKTKQPQLLYEAELYNLLKGGSGIPRVKWSGTDKDKNVLVLDLLGPSLEDLFYYCGKKFSLKTVLMLADQMLTRIEYLHSKGFLHRDIKPDNFLMGLGKKAKHIQVYMIDFGLAKRYRDPITNKHIPCRENKLLIGTPRYASRNTHSGFEQSRRDDLESLGYVLMYFIRGSLPWQGLQAPTNKQKYDKICEMKKSIPIDILCKSCPVQFASYFRYCHSLTFDQRPDYGFLKRMFRHLFNAQGYDDLFDWTILKYQQMRQTKTLIESNPPIIAVRSNLQPKDGDNQQGVSDVTQDIVAKPSINTDNPHVSINSKKSNAQKCNDKVPIEKHTEKNSDLSISSSMPRVFIENVSKLRIPAEASNQGCVSANNNYAPPTDTASPSSPFSSRPTPFSTEHPAPIGVDSTAVNQPLLHARFSLQNTPLLPHAGLLPIAGLHLICRCRSSSPAVVVSVARSGEWLDPLSSGSNHPCGPVLPLSHP 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03187 519 ProSiteProfiles Protein kinase domain profile. 9 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03187 519 MobiDBLite consensus disorder prediction 340 360 - -
Aip06g03187 519 Gene3D Transferase(Phosphotransferase) domain 1 1 336 - -
Aip06g03187 519 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 408 - -
Aip06g03187 519 SMART serkin_6 9 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03187 519 MobiDBLite consensus disorder prediction 407 437 - -
Aip06g03187 519 MobiDBLite consensus disorder prediction 407 433 - -
Aip06g03187 519 MobiDBLite consensus disorder prediction 340 361 - -
Aip06g03187 519 PANTHER CASEIN KINASE-RELATED 1 408 - -
Aip06g03187 519 Pfam Protein kinase domain 9 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03187 519 SUPERFAMILY Protein kinase-like (PK-like) 5 284 IPR011009 -
Aip06g03187 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03187 Aip-Chr6 127707587 127715893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03187 7 251 CBL-interacting serine-threonine protein kinases AT4G24400 27.668 1.72e-15 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Aip06g03187 Pkinase 5.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03187 K08960 - gmx:100782913 552.747