Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03135 ATGATTCAGGCTCAGCTATCTGAGTTTGTAAACGATGCTTTATTCTCATCAGTTTCATGCAAGCATCCTTCCCAGCCACCTCCTCTCATGGTGCCCATTACTGTTATCAATGGAGCTACTGCCAAAAGAGCTGTATGTTTGGATGGAACATTGACTGCCTATCACTTTCATCCTGGATCTGGATCCGGATCAGGAGCCAATAGTTGGCTCATTGACTTAGAGAAATTTATTTACTTTTTGACTGGTTACAAACTAATTTGGAAGAGGAAAAGGCACATGAAATTGCCAAGTTACAAGATGCTTCGCATGCAATGGTGA 318 0.4182 MIQAQLSEFVNDALFSSVSCKHPSQPPPLMVPITVINGATAKRAVCLDGTLTAYHFHPGSGSGSGANSWLIDLEKFIYFLTGYKLIWKRKRHMKLPSYKMLRMQW 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03135 105 PANTHER PECTIN ACETYLESTERASE 11 75 - -
Aip06g03135 105 Pfam Pectinacetylesterase 27 74 IPR004963 GO:0016787
Aip06g03135 105 PANTHER NOTUM-RELATED 11 75 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03135 Aip-Chr6 126872560 126873214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03135 14 89 Carbohydrate Esterase AT2G46930 51.316 8.48e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03135 K19882 - gmx:100819978 84.7297