Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03109 ATGATGGTGGATACGGGTTCCGTGTCAAGAAGTGCTGGTTCCCTTGTGGATATGATGCCAGAGAAAGATGATGATGGCCGGTTTGCAAGTGGAGGGTGGAAAAGTGAGGATGGAAGGCTGAGCTGTGGGTATTCAAGCTTCAGAGGGAAGAGAGTAACGATGGAGGATTTTTATGATATTAAAACATTGAAGATTGGTGGTCATTCAGTATGCTTATTTGGAATATTTGATGGTCATGGTGGTTCTCGTGCTGCAGAGTATTTGAAAGAGCATCTCTTTGATAATCTCATGAAGCATCCAAAATTTTTTACTGATGCCAAATTGGCTATAAGTGAAACGTATCAAGGGACTGATTCTCAATTTCTGGATTCTGAAAAAGACACTTTCCGGGATGATGGCTCTACTGCTTCAACCGCTGTTTTAATTGATAACCATCTCTATGTTGCTAATGTTGGAGATTCTAGAACTATAATATCGAAGGCTGGTAAAGCAATTGCTCTCTCTGAGGATCATAAGCCAAACAGAAGTGATGAACGGAAGAGAATTGAGAATGCTGGGGGTGTTGTCATGTGGGCAGGTACTTGGAGGGTAGGAGGTGTCCTAGCAATGTCTCGCGCCTTTGGCAATCGTATGTTGAAGCAGTTTGTTGTTGCAGAACCTGAGATCCAGGACCAGGAGATAGATGAACAAACTGAATTGCTGATTCTTGCAAGTGATGGACTTTGGGATGTAGTACCAAATGATGATGCCATCGCTCTTGCTTGCACAGAAGAGGAGCCTGAGGCAGCTGCTCGTAAGTTAACAGAAGCAGCATTTTCTCGTGGCAGTGCAGATAACATTACATGCATTGTGGTGCGCTTCCATCATGACAGAGCAGAACCCATTGGTACTGACAAAGTAGATGCCATTGTTCCTGACAAAGTAGATACTGCTGTTCCTAACAAAGTAGAAGTGGCATCAGCTAGTGTCAAGCAAGAGAGGAACAAAGCAGATGCCACTGTTCCTGACAGAGCAGAAGCGGCATCAGCTAGTGTCAAGCAAGGGGAGTCTACTTGA 1056 0.4422 MMVDTGSVSRSAGSLVDMMPEKDDDGRFASGGWKSEDGRLSCGYSSFRGKRVTMEDFYDIKTLKIGGHSVCLFGIFDGHGGSRAAEYLKEHLFDNLMKHPKFFTDAKLAISETYQGTDSQFLDSEKDTFRDDGSTASTAVLIDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDQEIDEQTELLILASDGLWDVVPNDDAIALACTEEEPEAAARKLTEAAFSRGSADNITCIVVRFHHDRAEPIGTDKVDAIVPDKVDTAVPNKVEVASASVKQERNKADATVPDRAEAASASVKQGEST 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03109 351 Pfam Protein phosphatase 2C 43 280 IPR001932 -
Aip06g03109 351 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Aip06g03109 351 MobiDBLite consensus disorder prediction 319 351 - -
Aip06g03109 351 MobiDBLite consensus disorder prediction 1 21 - -
Aip06g03109 351 PANTHER ALPHABET, ISOFORM E-RELATED 9 300 - -
Aip06g03109 351 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 9 300 - -
Aip06g03109 351 CDD PP2Cc 41 287 IPR001932 -
Aip06g03109 351 SMART PP2C_SIG_2 39 287 IPR001932 -
Aip06g03109 351 ProSiteProfiles PPM-type phosphatase domain profile. 41 287 IPR001932 -
Aip06g03109 351 Gene3D - 32 334 IPR036457 -
Aip06g03109 351 SUPERFAMILY PP2C-like 37 288 IPR036457 -
Aip06g03109 351 SMART PP2C_4 31 285 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03109 Aip-Chr6 126432912 126438244 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03109 1 293 PP2C-type Phosphatase Gene Family AT5G53140 79.863 4.40e-176 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03109 K17506 - gmx:100805795 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03109 06 126432912 126438244 Aip06g03109 06 126432912 126438244 ECH