Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03104 ATGGCGCCGTCGGATAAGGAAGCACTTGTTGAGAGCACCATAATGGCAATGGGGCTTCAGGATTGTGCAGACACTGTGATTGGGAACTGGCACTTGAGAGGGATAAGTGGTGGAGAAAAGAGAAGGGTTAGCATTGCCTTGGAGATCTTGATGAGGCCTAGATTGCTCTTCCTTGATGAACCTACAAGTGGACTTGACAGAAATCAAAGAACTATTGATGATCAAAACATAGATGGGCTAAAGAATTTTGATTTGCAGGTACTAAAGAGACTATTGGACTTTGACAAGAAACTTCCTTCTCCTGATGCTCTTCTCATCAATGGGCAAAGAGATTCTGCTGTCTTTACCGATCAAGCAGGGAAGACTTACAAATTCAGAGTGTCCAATGTTGGGTTAACAACATCAATTAACTTCAGGATTCAAGGCCACTCATTGAAACTGATTGAAGTTGAAGGTGCTCACACATTACAAGACACATATGAGTCCCTTGATAATCATATGGGTCAATCAGTGGtgacgtgtaccacaaagctcggctaa 540 0.4037 MAPSDKEALVESTIMAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDRNQRTIDDQNIDGLKNFDLQVLKRLLDFDKKLPSPDALLINGQRDSAVFTDQAGKTYKFRVSNVGLTTSINFRIQGHSLKLIEVEGAHTLQDTYESLDNHMGQSVVTCTTKLG 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03104 179 Pfam Multicopper oxidase 86 171 IPR001117 -
Aip06g03104 179 Pfam ABC transporter 10 63 IPR003439 GO:0005524
Aip06g03104 179 Gene3D - 8 72 IPR027417 -
Aip06g03104 179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 80 IPR027417 -
Aip06g03104 179 Gene3D - 79 176 IPR008972 -
Aip06g03104 179 SUPERFAMILY Cupredoxins 96 171 IPR008972 -
Aip06g03104 179 PANTHER SKU5 SIMILAR 16 84 173 - -
Aip06g03104 179 PANTHER MULTI-COPPER OXIDASE 84 173 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03104 Aip-Chr6 126374678 126375604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03104 19 78 Calmodulin-binding Proteins AT2G36910 40.000 6.19e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03104 K05681 - aip:107612233 150.984