Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03102 ATGGCATCGAGTTCAATGTCATCTTCAGGGTCATGGAGTGCTAAAGACAATAAGGCCTTTGAAAGGGCATTGGCGGTCTATGATAAGGACACCCCTGACCGGTGGTACAACGTTGCTCGCGCCGTTGGCGGAAAAACTCCCGACGAAGTTAAGCGCCACTACGAACTTCTCCTCCGAGATGTTGGCTACATAGAATCTGGGCAAGTGCCATTTCCAAAGTACAAGACAAATGGAGGCTCTAATTAG 246 0.4919 MASSSMSSSGSWSAKDNKAFERALAVYDKDTPDRWYNVARAVGGKTPDEVKRHYELLLRDVGYIESGQVPFPKYKTNGGSN 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03102 81 CDD SANT 18 58 IPR001005 -
Aip06g03102 81 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Aip06g03102 81 Gene3D - 2 71 - -
Aip06g03102 81 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Aip06g03102 81 SUPERFAMILY Homeodomain-like 4 59 IPR009057 -
Aip06g03102 81 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 79 IPR044636 GO:0003700
Aip06g03102 81 SMART sant 8 60 IPR001005 -
Aip06g03102 81 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03102 Aip-Chr6 126340919 126341164 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip06g03102 Myb_DNA-binding 2.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03102 - - vra:106761815 143.28