Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03101 ATGTTGAACGAACCTAGCAAAGAACCTTTAGAGGCAAACTCAACAACCAAAACTTGCATGATTATGGATGTAATCAATAATTGCAGGATTCACATGGACGTAACTGGAAAGCTGTTCGGTCTTGGAAGCGGAACTGTGGGGAGCCTACCATGGGATGAGAATAGGTTGGGACATGAGAAGGCTTATTGTGGAAGTAGATTCAACAGAGGGTCATGGAGTGCCAAGGACAATAAGGCCTTTGAAAGGGCATTGGCGGTTTATGATAAGGACACCCCTGACCGTTGGTACAATGTTGCTCGCGCCGTTGGCGGAAAAACTCCCGACGAAGTTAAGCGCCACTACGCACTTCTCCTCGGAGATGTTGGCTACATAGAATCAGGGCAAGTGCCATTTCCAAAGTACAAGAAAAATGGAGCCTCTAATTAG 426 0.4648 MLNEPSKEPLEANSTTKTCMIMDVINNCRIHMDVTGKLFGLGSGTVGSLPWDENRLGHEKAYCGSRFNRGSWSAKDNKAFERALAVYDKDTPDRWYNVARAVGGKTPDEVKRHYALLLGDVGYIESGQVPFPKYKKNGASN 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03101 141 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 68 139 - -
Aip06g03101 141 Gene3D - 64 131 - -
Aip06g03101 141 CDD SANT 71 118 IPR001005 -
Aip06g03101 141 ProSiteProfiles Myb-like domain profile. 64 118 IPR001005 -
Aip06g03101 141 SUPERFAMILY Homeodomain-like 65 117 IPR009057 -
Aip06g03101 141 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 68 139 IPR044636 GO:0003700
Aip06g03101 141 SMART sant 68 120 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03101 Aip-Chr6 126321427 126327595 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip06g03101 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03101 - - ahf:112719426 129.028