Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03099 ATGAAGGATCCAAAACGACTCTCGCCGCGGCGGATCACTTTTCGGCGAGTTGTCGGCGATTCAGACGGTACCATCACGAGCTTCAAGAATGCTCGCCGGAGGAGGCTCAGAATCCGGCGAATGAAGTACACCTGCGAGGCCAAGATCCACGTCGAGAATGGAGGTTCCCCGGCGGCGGATGCTGATGCGGAGGTTGTTGATTCTGATAGCAAGCGGAGTGAGATTCACGAATCCATGGAAATATCACTGTCGCTGTCGTCAACGTCATCTGAGGAGGAGGATCGGCCGTCGGTCGGGGAAAACTTCGGTGGCGTATTGTCGTACGGTTCGGTGTCGGTTATTGGAAACAGGAAGGAGATGGAGGATGCGGTGAGCGTGGAGATAGGCTTTGTTGGGAAGGAGAATTCGAAGTGCGACTTCTTCGCGGTGTTTGATGGTCACGGCGGAGCTCAGGTGGCGCAGGTGTGCCGGGAGCGGCTGCACCGGCTGGTGGCGGAGGAGGTAGAGAGGAGAAATGAGAAGGTCGAGTGGGATTGGGAGGGTGAAGTCGTCGTCGCAAATTGCGGTGATTGTAGGGCCGTGTTGGGAAGAGATGGCGAGGCCGTTGATTTGTCTAGTGATCATAAGCCCGACAGGCCTGATGAGTTGATGCGAATCGAAGAGGCTGGTGGAAGGGTCATAAACTGGAATGGCCAGCGCGTTCTAGGTGTTCTTGCCACTTCGCGATCTATAGGGGACCAATACCTTAGGCCATATGTAATATCAAAACCAGAAGTCACTGTGACAAAGCGAACCAACAAAGATGAATTCCTTATACTAGCAAGTGATGGCTTGTGGGATGTGATCTCCAGCGAAGCAGCATGCCAGGTTGTAAGGAGAAGCCTCAACGGCCAGATTAAGAGAGTTTCCAATGGAGTTGGGAGGCAAAGCTGCGCCACCGAGGCTGCGGCACTCTTGGTTGAGATAGCAATGGCAAAGGGAAGCAGAGATAACACCAGTGTCATCGTCGTGGAGCTAAGCAGAACATCTTCGTCCAGCTGA 1041 0.5389 MKDPKRLSPRRITFRRVVGDSDGTITSFKNARRRRLRIRRMKYTCEAKIHVENGGSPAADADAEVVDSDSKRSEIHESMEISLSLSSTSSEEEDRPSVGENFGGVLSYGSVSVIGNRKEMEDAVSVEIGFVGKENSKCDFFAVFDGHGGAQVAQVCRERLHRLVAEEVERRNEKVEWDWEGEVVVANCGDCRAVLGRDGEAVDLSSDHKPDRPDELMRIEEAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRTNKDEFLILASDGLWDVISSEAACQVVRRSLNGQIKRVSNGVGRQSCATEAAALLVEIAMAKGSRDNTSVIVVELSRTSSSS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03099 346 SMART PP2C_4 97 337 IPR001932 -
Aip06g03099 346 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 66 175 - -
Aip06g03099 346 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 181 340 - -
Aip06g03099 346 PANTHER ALPHABET, ISOFORM E-RELATED 66 175 - -
Aip06g03099 346 Pfam Protein phosphatase 2C 183 332 IPR001932 -
Aip06g03099 346 Pfam Protein phosphatase 2C 108 171 IPR001932 -
Aip06g03099 346 ProSitePatterns PPM-type phosphatase domain signature. 140 148 IPR000222 GO:0043169
Aip06g03099 346 MobiDBLite consensus disorder prediction 64 78 - -
Aip06g03099 346 MobiDBLite consensus disorder prediction 53 98 - -
Aip06g03099 346 ProSiteProfiles PPM-type phosphatase domain profile. 107 339 IPR001932 -
Aip06g03099 346 PANTHER ALPHABET, ISOFORM E-RELATED 181 340 - -
Aip06g03099 346 Gene3D - 179 345 IPR036457 -
Aip06g03099 346 Gene3D - 103 178 IPR036457 -
Aip06g03099 346 SUPERFAMILY PP2C-like 103 340 IPR036457 -
Aip06g03099 346 CDD PP2Cc 107 339 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03099 Aip-Chr6 126298927 126302934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03099 108 341 PP2C-type Phosphatase Gene Family AT1G07430 44.479 4.44e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03099 K14497 - gmx:100807235 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03099 06 126298927 126302934 Aip06g03099 06 126298927 126302934 ECH