Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03098 ATGTCGCACCGTTCAATAGAATTGGCGCTGGCTGTGGTCGGGTGGTGCGAGAGCGAGACTACGAGTTCGGTGAGAATGACAAGGGTTGAACGGGTCTCTTTCTTGTCTTGGAATTTGGGAAAAGGGAATAGGTTTCCATCAGTAAGCTTCTTTGTGAAGCAAATCGATTACAAATCTCAGCAAATTCAGATCTATCACCCAAATAACTGCCTTGCTAGCCAGCTTTTAGCGCTCGGAAATTCGTCAACTTCACCTTTCCGATTCATATCACCATATTACGGCGGCGAAACTAGTTACAGTAATGTCTCTTTCTTTAGTTGCGCTTCGAGTTCTTCCTATTCCTGTCCAATTTTGCAACTAGATTCTAGTAGCTTCATCATTGATCCGGGAATACTATCGTGCACCAAGGTGCGTGATGTTTTATCGGTCCAATGGAGGTTTACGGATGATGATGAGACTAGTTTGTTTCTTGGATGGTCGAACCCTAACTGTGGGCAGTGTGAAGCACAGGGCAAGAAATGCAGACTCAAGAGCGATGGTACGAAAGAGGAAATTGAGTGTTTCGTTTGCAAAACAAACAAGATTTCGACATCCACTCTTGTTCTAATTGTTGCAGGGACAATAATTTGTTTGATGCTTTTGGTCTTGTTGGCCTTTGCAATGTACCATATTTATCGGTACTTTAAGACTAAAGGAGAAGACCAAGACAGGATAGAAAAATTCTTGGAGGATTACAGGGCCATGAAGCCTACAAGATTCACTTACAAAGATATTAAGAGAATCACAAATGGCTTTAAGGAAAGCTTAGGCGAAGGAGCACACGGAGCAGTATTCAAAGGAATGCTCTCCAAAGAAATTCTTGTTGCCGTGAAGGTACTCAACGATACGCAAGGTGATGGCAAGGATTTCATAAATGAAGTGGGAACTATGGGAAAGATTCATCATGTCAATGTTGTTCGCTTGCTCGGATTCTGCGCAGACGGATTCCACCGTGCTCTTGTCTATGATCTGTTTCCGAACGGTTCGTTGCAGAAATTCTTAGCTCCACCGGATAACAGGGATGCTTTCCTTGGTTGGGTGAAGCTTCAGAGAATTGCTCTTGGTGTTGCCAAAGGCCTTGAGTATCTCCATCTTGGTTGTGATCATAGGATACTCCATTTTGACATAAATCCCCATAATGTGTTACTAGATGATCACTTCACTCCAAAAATAACAGATTTTGGCCTTGCAAAGTTGTGTCCGAAAAATCAAAGCACGGTGTCTATGACTGCGGCGAGGGGGACATTGGGCTATATTGCCCCTGAAGTATTCTCAAGAAATTTTGGTAACGTGTCGTACAAGTCTGATATTTATAGCTTTGGAATGTTGCTACTTGAGATGGTTGGAGGAAGAAAGAACACAAATGTGTCTGGTGAGGAAATTTTCCAAGTTTTGTACCCAGAATGGATCCATAATATGCTTGAAGGGAAAGACATCCACATTGATATTGACAATGAGGGAGACATGAAAATTGCCAAGAAACTTGCCATTGTAGGACTTTGGTGCATTCAGTGGAATCCTGTAGATCGTCCATCAATGAAAACTGTGGTACAAATGCTTGAAAGGGAAGGAGACAAGTTAACGGTCCCCCCTACACCGTTTGACTCCACTACCAGCTCAAGTAGAAACAATAATAATGCAGTTGTTTCATCAAGACATCTAAATTTTGAGCTAGAGGTTATTCCTGAGTTAGAGTAA 1737 0.4237 MSHRSIELALAVVGWCESETTSSVRMTRVERVSFLSWNLGKGNRFPSVSFFVKQIDYKSQQIQIYHPNNCLASQLLALGNSSTSPFRFISPYYGGETSYSNVSFFSCASSSSYSCPILQLDSSSFIIDPGILSCTKVRDVLSVQWRFTDDDETSLFLGWSNPNCGQCEAQGKKCRLKSDGTKEEIECFVCKTNKISTSTLVLIVAGTIICLMLLVLLAFAMYHIYRYFKTKGEDQDRIEKFLEDYRAMKPTRFTYKDIKRITNGFKESLGEGAHGAVFKGMLSKEILVAVKVLNDTQGDGKDFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDLFPNGSLQKFLAPPDNRDAFLGWVKLQRIALGVAKGLEYLHLGCDHRILHFDINPHNVLLDDHFTPKITDFGLAKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSFGMLLLEMVGGRKNTNVSGEEIFQVLYPEWIHNMLEGKDIHIDIDNEGDMKIAKKLAIVGLWCIQWNPVDRPSMKTVVQMLEREGDKLTVPPTPFDSTTSSSRNNNNAVVSSRHLNFELEVIPELE 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03098 578 ProSitePatterns Protein kinases ATP-binding region signature. 269 291 IPR017441 GO:0005524
Aip06g03098 578 Gene3D Transferase(Phosphotransferase) domain 1 338 542 - -
Aip06g03098 578 MobiDBLite consensus disorder prediction 544 559 - -
Aip06g03098 578 PANTHER RUST RESISTANCE KINASE LR10-RELATED 45 578 IPR045874 GO:0004672
Aip06g03098 578 Gene3D Phosphorylase Kinase; domain 1 236 337 - -
Aip06g03098 578 Pfam Protein kinase domain 266 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03098 578 ProSiteProfiles Protein kinase domain profile. 263 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03098 578 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 45 578 - -
Aip06g03098 578 MobiDBLite consensus disorder prediction 540 559 - -
Aip06g03098 578 SUPERFAMILY Protein kinase-like (PK-like) 241 534 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03098 Aip-Chr6 126281176 126284515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03098 116 546 Receptor kinase-like Gene Family AT1G66910 40.215 9.34e-104 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip06g03098 Pkinase 5.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03098 - - gmx:100819302 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03098 06 126281176 126284515 Aip06g03098 06 126281176 126284515 ECH