Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03097 ATGGTGGGAGCATGGTACAGTGTGACTGAAATCAAGGTTGGGTGCAGTTTGATGGTGGCTACGCTTACGGATAAGATTCCGGCGGAGATCGGAGAAGGGAGTAACAACGTGTCTTATGAGGAGATCCGGAAGGTGGTTGGCGAAGGGTTTAGCGTCTCTTGGTTGCCGGCGGTTTGCGAGGAGAAGTGTGGAAAGAAGACAAATTGCAAGGTGGTCAATGTTTCGACTGGAGAAGTCCAATGTGACAGGCGCTATTGCCACTACGCTTACCATACAACCGATAAGTGCGGAATTGCAGAACAGGCTATCGGTTATGCTCGAGCTTATCTCAGAGGCATTGTATTTGGATTAGGAAGTAGAATAACATTCAGCACAAGAAACCTGGGCAACGCAGTTGGGCTGGAGTATTTTGATGGGGGAATATTCATTGGTAGAAATATTATACCAGTAATACTTGTAACTAGATACGTACTTGGAGTTGCAGTTCTACTTTCAGTATTGATCTACATATGGCGACGAAGACATTGGTCAATATATGGAAACATTGAACATTTTTTGCTAGACAGCAATCTAAATCCCATAAGGTATGAATACAAAGAAATCAAGAAAATGAGTGGTGGTTTCAAAGTGAAATTGGGTAAAGGTGGCTTTGGGGCAGTATACAAAGGAAAACTTCGTAGTGGTCCTGATGTAGCGGTAAAGATGTTGAACGAACCCAATGCTAATGGCCAAGACTTCATCAACGAAGTTGCTACAATTGGAAGAATACATCATGTTAATGTGGTACGTCTTGTTGGATATTGTGTCGAGAAAAAAAAGCGTGCTCTGGTGTATGAATTCATGCCTAATGGATCATTGGATAAATACATTTTTGCTAAGGAAGGGACTGTGCCTTTGAGTTACGAGAAGATGTATGAAATATCTCTTGGAGTGGCTCGTGGAATTGCGTATTTACATCAAGGTTGTGATATGCAAATTCTACATTTTGATATCAAGCCGCATAATATTCTTTTAGATGACAACTTCGTCCCAAAGGTATCTGATTTTGGACTTGCAAAGCTATATCCCGTGGATGGTAGCACTGTCACTTTGACTGCAGCAAGAGGAACTTTAGGCTACATGGCTCCGGAGTTGTTCTACAAAAACATTGGAGGAGTATCTTATAAGGCTGATGTCTATAGTTTTGGAATGCTTTTGATGGAAATGGCAAGTAGGAGGAGGAATTCAAATCCTAATGCCGATGAATCAAGCCAATTTTACTTCCCATTTTGGATACATGATCAGCTTTATGAGGAGAGTGAGATTGAAATCGAAGATGCCTCAGAGGAGGAAAAGAGCCTAGTTAAAAAGATGTTCTTAGTTGCACTTTGGTGCATACAGCTAAAGCCTAGTGATCGTCCTTCGATGAACAAGGTAGTAGAGATGCTGGAAGGGGATAACGACGGCAGTCTTGCATTGCCTCCAAAGCCTTCTTTCTATTCACATGAAGCTTCTAGATATGTTAAGGAGGTCAATTCCAACCAAGCGTCGAGCATGAATTCCTCTGGTACTAGTTATCTTGGTGAAACCACAACTGACTATTCAATGGAGGATGATGATTAA 1602 0.4182 MVGAWYSVTEIKVGCSLMVATLTDKIPAEIGEGSNNVSYEEIRKVVGEGFSVSWLPAVCEEKCGKKTNCKVVNVSTGEVQCDRRYCHYAYHTTDKCGIAEQAIGYARAYLRGIVFGLGSRITFSTRNLGNAVGLEYFDGGIFIGRNIIPVILVTRYVLGVAVLLSVLIYIWRRRHWSIYGNIEHFLLDSNLNPIRYEYKEIKKMSGGFKVKLGKGGFGAVYKGKLRSGPDVAVKMLNEPNANGQDFINEVATIGRIHHVNVVRLVGYCVEKKKRALVYEFMPNGSLDKYIFAKEGTVPLSYEKMYEISLGVARGIAYLHQGCDMQILHFDIKPHNILLDDNFVPKVSDFGLAKLYPVDGSTVTLTAARGTLGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASRRRNSNPNADESSQFYFPFWIHDQLYEESEIEIEDASEEEKSLVKKMFLVALWCIQLKPSDRPSMNKVVEMLEGDNDGSLALPPKPSFYSHEASRYVKEVNSNQASSMNSSGTSYLGETTTDYSMEDDD 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03097 533 PANTHER RUST RESISTANCE KINASE LR10-RELATED 6 508 IPR045874 GO:0004672
Aip06g03097 533 SUPERFAMILY Protein kinase-like (PK-like) 193 477 IPR011009 -
Aip06g03097 533 Gene3D Phosphorylase Kinase; domain 1 187 280 - -
Aip06g03097 533 SMART serkin_6 206 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03097 533 CDD STKc_IRAK 212 478 - -
Aip06g03097 533 Gene3D Transferase(Phosphotransferase) domain 1 281 484 - -
Aip06g03097 533 MobiDBLite consensus disorder prediction 504 525 - -
Aip06g03097 533 Pfam Protein kinase domain 210 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03097 533 ProSiteProfiles Protein kinase domain profile. 206 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03097 533 MobiDBLite consensus disorder prediction 504 533 - -
Aip06g03097 533 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 6 508 - -
Aip06g03097 533 Coils Coil 430 450 - -
Aip06g03097 533 ProSitePatterns Protein kinases ATP-binding region signature. 212 234 IPR017441 GO:0005524
Aip06g03097 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 326 338 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03097 Aip-Chr6 126276325 126280758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03097 145 514 Receptor kinase-like Gene Family AT4G18250 45.026 3.08e-104 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip06g03097 Pkinase 8.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03097 - - lja:Lj0g3v0275229.4 763.837