Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03093 ATGCTTCTAATCCGCCGCTCTCGCGTTCCCCCATTCCTCTGCTTCGTGCCTTCGCCGCCGTCCCTCACTCGTCTAAAGGATTCGGTAAGAGAGATGGGGGCCAAGGCAAAGAAAGCTATGAAGAAGAGTTTGAAGAAGGCTACTTCTACCAAGCCATCATCTTCTTCCATCAACAAATCAGAGGCTCCTGATTATTTGCCCTTGGAAGGTGGTCCTGCTCGCAAGCTCCCTGAACAGAAGCCTTTGGAGAGTGCCGCAACAGTGTTGTATATTGGCCGCATTCCACATGGGTTTTATGAGGAGGAGATGCAAGGTTTTTTTGGACAATTTGGAACGGTCAAGAGATTGAGAATTGCAAGAAATAAGAAAACAGGAAAATCAAGGCATTTTGGGTTCATCGAATTTCAGTCTCCTGAGGTAGTAGCTAAAGTTGTAGCTGAAACTATGCACAATTATCTGCTTTTCGAACACCTTCTCCAAGTCCACTTGATACCCCCTGAGGAAGTTCATCCACGATTATGGAGAGGTTTCAATTACAAGCACAAACCAATTGATTCAGTACAACTTGAACGAGGGCGACATGACAAGGAAAGAACATTGGAAGAGTACAATAAGTTGGTAGAAAAGATTGTGAAGCGTGACAATAAACGACGAAAAAGGTTGGAGGCTGCTGGCATTGATTACGAGTGCCCTGCGATTGTTGGTAACATCCATCCCGCACCAAAGAAAATAAAGTTTGAAGACTAA 747 0.4485 MLLIRRSRVPPFLCFVPSPPSLTRLKDSVREMGAKAKKAMKKSLKKATSTKPSSSSINKSEAPDYLPLEGGPARKLPEQKPLESAATVLYIGRIPHGFYEEEMQGFFGQFGTVKRLRIARNKKTGKSRHFGFIEFQSPEVVAKVVAETMHNYLLFEHLLQVHLIPPEEVHPRLWRGFNYKHKPIDSVQLERGRHDKERTLEEYNKLVEKIVKRDNKRRKRLEAAGIDYECPAIVGNIHPAPKKIKFED 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03093 248 Gene3D - 24 170 IPR012677 -
Aip06g03093 248 MobiDBLite consensus disorder prediction 46 61 - -
Aip06g03093 248 PANTHER - 32 247 - -
Aip06g03093 248 PANTHER MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN 32 247 - -
Aip06g03093 248 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 89 147 IPR000504 GO:0003723
Aip06g03093 248 CDD RRM_NIFK_like 88 162 - -
Aip06g03093 248 SUPERFAMILY RNA-binding domain, RBD 87 229 IPR035979 GO:0003676
Aip06g03093 248 SMART rrm1_1 88 162 IPR000504 GO:0003723
Aip06g03093 248 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 87 166 IPR000504 GO:0003723
Aip06g03093 248 Coils Coil 193 213 - -
Aip06g03093 248 MobiDBLite consensus disorder prediction 33 77 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03093 87 161 Eukaryotic Initiation Factors Gene Family AT1G71770 33.333 2.49e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03093 K14838 - gmx:100814276 321.627