Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03088 ATGACAGAGTATGATCTGTTAGTAGAAGGAGATTTGTTCAAAGCACCGGAACCTATCATAGAAGAACCACTGATAGATGTGGATCCAATGACTGCAGCAGCCATCTCAATGATATCTTGCGGGGAAGATGTATCCTCACAGGGTCTAGAATCTCAGGACATCGACATTCTTCAGAACGATAATCAGCTCTTGAGTGAGGTGTTCTACGAGTGCAAAAAGGATCTCATAGAGAAGGCAGCGATAGAGTCACCGCTGTCTGATATATTGGAAATCAATATTCCTGCTCTGAATGTAGATGACAGTTTCACTCAAGAAAATAAACCAATTCCTGATGTGCCATTGGCCAAGAGTGTCAGTTCTAGAAGCTTGAGTGCAATGGATTGGATGAATTCTGTTGGCATGAAGCCTACTTTTCTAGAATTCCCTGGAATTGATTTCAATGAGGTTTATGGCATGCGACGAGCATTTAGTGAGGGAGATATAAAGACACTTGGTAATGGAAACATGAATGTTGCTCAATCTCCCCATGATAGGCCTTCTCTTCTTAGCAACTGCACCAGCGAGGAACGGCAAGAAAAACTCTCGAGATATAGAAACAAGAAGACAAAGAGAAATTTTGGAAGGAAGATTAAGTATGCTTGCAGGAAGGCACTCGCCGACAGCCAGCCAAGAATCCGCGGAAGGTTTGCAAAGACGGAAGAATCCGACATAAAGAGGCAATGA 723 0.4302 MTEYDLLVEGDLFKAPEPIIEEPLIDVDPMTAAAISMISCGEDVSSQGLESQDIDILQNDNQLLSEVFYECKKDLIEKAAIESPLSDILEINIPALNVDDSFTQENKPIPDVPLAKSVSSRSLSAMDWMNSVGMKPTFLEFPGIDFNEVYGMRRAFSEGDIKTLGNGNMNVAQSPHDRPSLLSNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESDIKRQ 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03088 240 Pfam CCT motif 190 232 IPR010402 GO:0005515
Aip06g03088 240 ProSiteProfiles CCT domain profile. 190 232 IPR010402 GO:0005515
Aip06g03088 240 PANTHER CCT MOTIF FAMILY PROTEIN 1 238 - -
Aip06g03088 240 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03088 Aip-Chr6 126107059 126110635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03088 186 236 C2C2-CO-like Transcription Factor Family AT5G57660 49.020 3.31e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip06g03088 CCT 1.4e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03088 - - gmx:100814332 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03088 06 126107059 126110635 Aip06g03088 06 126107059 126110635 ECH