Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03080 ATGTGTAAAGATGAGTGTGGCAATATGAGGGCAGAAGATGAGGGAGCTGGAGAGACAAAGCCCATGAGAAAACTTGACACATTATCAGTTACCAAGCACACGAAGAGCTTGCGTCGCCTAAGATCAGTTACACTCACTAGATTATGGCCTACTCCTTTTATTGCTTTGCTGGATTTTGGAATCAAAGAGTTTGTTTCTGACTTGGAATCAAACACAGTAGGTGACCAGAAAAAGGGGCTAATAAGCCAGAAAATGAGCATGAAGCTGAGCCTCTTCATATTTGCTTTCATGATCATTGGAGCAATGTTCTTTGGTGCTGAGGCTGAACCATTGGAAGATGAACAAGCTTTGCTTGATTTCTTTCACAAAATTGATCACTCAAAGCATCTCAATTGGGGTTACAAGACTTCTCTATGCAAGAGCTGGACAGGAGTTACCTGTGACTCTCACCAATCGCGAGTCGTCGGCCTCAGGCTACCACGAGCCGGATTAATTGGTCCCATACCATCCAACACTCTCAGTCGCCTCTCGGCCCTTCAGACTCTGAATCTTGAATCAAATAGAATAACTGGTCCATTGCCATTGGATTTTTCAGTTTGGAAAAATCTTACCATAGCAGATTTTTCCAACAATTCTTTCATTGGAAGCATCCCTTCCTCAATTTCAAAGTTGACTCATCTCAATTCTTTAGATTTGTCCCACAACTCTCTTTCGGGTGAAATTCCTGACCTCAATGTTCCTAGCTTGAAAGAGCTGAATTTGGCCAACAATAACCTTAGTGGAATTGTGCCCAAATCCCTTCAGAGATTTCCGAGTTGGGTCTTTTCCGGTAACAAGCTTAATCTTGATCTTACTCTTAATCACACCTCTGAATATGCATCTGCTAATTCTCCTCTTCAACAACCGAATAATTCTCACCCAACAAGGAAAAACAAAAGGCTCAGTGAACCTGCATTGCTTGGTATCATAATAGCTGTTAGTCTGGTGGGATTTGCAGCCATCGCGAGTTTCGCAATTGTGTTCTGTTATAAGAAAGGAAGTGGTGGTGGAGGTGGACAGTCAGTTATGAAGTCCCATAAAACAGAATTCTCGTCGAAGACAGAAGCTTCGTTGAGCAGAGACAGGAACAAAATAGTCTTCTTTGAAGGCTGCAATCTTGCATTTGACCTGGAGGACTTGTTGAGAGCTTCTGCTGAGGTTCTTGGAAAGGGCACATTTGGAACTGTCTATAAGGCTGCAATAGAAGATGCAACGACGGTGGCAGTGAAGAGGTTGAAAGAGGTAACTGTCGGAAAACGCGAGTTCGAACAGCAGATGGAGGTGGTGGGGAGAATTAGGCATGACAACTTGGCTGCTCTAAGAGCATATTATTACTCAAAGGAGGAGAAACTTATGGTATATGATTATTATGAACAGGGCAGTGTTTCTTCAATGTTACATGGTATGTTTTAA 1452 0.4263 MCKDECGNMRAEDEGAGETKPMRKLDTLSVTKHTKSLRRLRSVTLTRLWPTPFIALLDFGIKEFVSDLESNTVGDQKKGLISQKMSMKLSLFIFAFMIIGAMFFGAEAEPLEDEQALLDFFHKIDHSKHLNWGYKTSLCKSWTGVTCDSHQSRVVGLRLPRAGLIGPIPSNTLSRLSALQTLNLESNRITGPLPLDFSVWKNLTIADFSNNSFIGSIPSSISKLTHLNSLDLSHNSLSGEIPDLNVPSLKELNLANNNLSGIVPKSLQRFPSWVFSGNKLNLDLTLNHTSEYASANSPLQQPNNSHPTRKNKRLSEPALLGIIIAVSLVGFAAIASFAIVFCYKKGSGGGGGQSVMKSHKTEFSSKTEASLSRDRNKIVFFEGCNLAFDLEDLLRASAEVLGKGTFGTVYKAAIEDATTVAVKRLKEVTVGKREFEQQMEVVGRIRHDNLAALRAYYYSKEEKLMVYDYYEQGSVSSMLHGMF 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03080 483 Gene3D Ribonuclease Inhibitor 111 290 IPR032675 -
Aip06g03080 483 Pfam Leucine Rich Repeat 248 269 IPR001611 GO:0005515
Aip06g03080 483 ProSiteProfiles Protein kinase domain profile. 395 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03080 483 PANTHER OS05G0588300 PROTEIN 181 481 - -
Aip06g03080 483 ProSitePatterns Protein kinases ATP-binding region signature. 401 432 IPR017441 GO:0005524
Aip06g03080 483 Gene3D Phosphorylase Kinase; domain 1 360 469 - -
Aip06g03080 483 PANTHER OS05G0588300 PROTEIN 96 191 - -
Aip06g03080 483 SUPERFAMILY Protein kinase-like (PK-like) 399 482 IPR011009 -
Aip06g03080 483 Pfam Protein tyrosine and serine/threonine kinase 399 480 IPR001245 GO:0004672|GO:0006468
Aip06g03080 483 MobiDBLite consensus disorder prediction 1 21 - -
Aip06g03080 483 ProSiteProfiles Leucine-rich repeat profile. 248 269 IPR001611 GO:0005515
Aip06g03080 483 PANTHER LRR RECEPTOR-LIKE KINASE 96 191 - -
Aip06g03080 483 PANTHER LRR RECEPTOR-LIKE KINASE 181 481 - -
Aip06g03080 483 SUPERFAMILY L domain-like 125 280 - -
Aip06g03080 483 Pfam Leucine rich repeat N-terminal domain 112 148 IPR013210 -
Aip06g03080 483 PRINTS Leucine-rich repeat signature 246 259 - -
Aip06g03080 483 PRINTS Leucine-rich repeat signature 227 240 - -
Aip06g03080 483 ProSiteProfiles Leucine-rich repeat profile. 226 247 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03080 Aip-Chr6 125855325 125858627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03080 102 481 Receptor kinase-like Gene Family AT4G23740 47.711 5.73e-113 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip06g03080 PK_Tyr_Ser-Thr 1.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03080 - - aprc:113851984 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03080 06 125855325 125858627 Aip06g03080 06 125855325 125858627 ECH