Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03079 ATGGGCACAGCAAGAGGCATTGCTCATATCCATGCTCAAAACGGAGGGAAACTTATCCACGGTAACATTAAGTCCTCAAATATCTTTCTCAACTCCCAGGGATATGGTTGTATATCGGACACCGGCCTCGCCACATTAATTAGCCCAATACCACCAGCAGCACTAAGGGCAGCAGGATACCGTGCACCAGAAGTAACCGACACGCGGAAGGCGACGGTTGCAGCTGATGTCTACAGTTTCGGAGTCCTCCTTCTAGAGCTCCTAACAAGAAGGTCTCCAATGCACGCCACTGGAGGAGAGGAAGTAGTCCACTTAGTTAGGTGGGTGAACTCTGTTGTTAGAGAGGAGTGGACTGCAGAAGTCTTTGATGTGGAATTACTAAAGTACCCTAACATAGAGGAGGAAATGGTTCAGATGCTACAATTGGGAATGGCATGTGTTGCTAGGGTTCCAGATAAGAGACCAACAATGTTGGAAGTGGTGAAAGTGGTGGAGGAAATTCGATTACATAGTGGGAATAGACCGTCCTCGGAATCTAGATCAGAGGGTTCTACACCAAATAGAGGACATGCTTCCACATCAATTATTACAGATTTAGCAGTCCGAGGAGTGAGAAATAGCGAATTTCTTTCTCGCTTCCTCGGCGGAATTGACGGGCGGTGGTCGAGATTTGCGCATATCGTGAAGGTCTCCCCCAACGATTACTTGATGAGATTGGGTCGACTAGTGGAAAATCAGTTCCAAAGGAATCAGGACCATTTATTTTGGGTAATAAGTGAACAGTCTTTATTGATCATAGGTGAAAATGAGGTCTCTGTTATCAGCAAGGGTGGGGATATTGGCACAGAGGCTGCACAATCTAGTGCGCGTCCTTTTAACGCAAAGAGAAAGAAACTCAATTCAAAAAAGTCTCTTGAAATTTTGTCCGTGATAGATTTAGATATTGGTTCCGATGTTCAGAAAGGGGGTGAAAAGACAGATAGACTTCATGGTTTTGTTGGTGGTGCAAATGCCGAATATGTCTGGAGCGATCAATTTCCATTCATGACACTAGCCGACAAGGTCGCTCAGTGCCCAAATGATGTTTAG 1089 0.4545 MGTARGIAHIHAQNGGKLIHGNIKSSNIFLNSQGYGCISDTGLATLISPIPPAALRAAGYRAPEVTDTRKATVAADVYSFGVLLLELLTRRSPMHATGGEEVVHLVRWVNSVVREEWTAEVFDVELLKYPNIEEEMVQMLQLGMACVARVPDKRPTMLEVVKVVEEIRLHSGNRPSSESRSEGSTPNRGHASTSIITDLAVRGVRNSEFLSRFLGGIDGRWSRFAHIVKVSPNDYLMRLGRLVENQFQRNQDHLFWVISEQSLLIIGENEVSVISKGGDIGTEAAQSSARPFNAKRKKLNSKKSLEILSVIDLDIGSDVQKGGEKTDRLHGFVGGANAEYVWSDQFPFMTLADKVAQCPNDV 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03079 362 Pfam Protein kinase domain 3 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03079 362 ProSiteProfiles Protein kinase domain profile. 1 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03079 362 MobiDBLite consensus disorder prediction 176 192 - -
Aip06g03079 362 SUPERFAMILY Protein kinase-like (PK-like) 2 164 IPR011009 -
Aip06g03079 362 Gene3D Transferase(Phosphotransferase) domain 1 1 185 - -
Aip06g03079 362 PANTHER LRR RECEPTOR-LIKE KINASE 1 193 - -
Aip06g03079 362 MobiDBLite consensus disorder prediction 171 192 - -
Aip06g03079 362 PANTHER OS05G0588300 PROTEIN 1 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03079 Aip-Chr6 125852649 125854640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03079 1 187 Receptor kinase-like Gene Family AT4G23740 59.799 2.29e-77 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip06g03079 Pkinase 1.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03079 - - adu:107494969 384.415