Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip06g03077 | ATGGAACAAAGCATCCCAATAAAACAAACTAGACATCGTAGTGTCACCAACAAGTTTATGAAACAAAAGAAAAATTTTGATCTTGTCCATCTCAATGATCCCATTTCCAGAAAGCCTAAAGTAATTCGTATATTTCTAACTGATCAAGATGCTACTGACTCTTCCGGTGACGAAGAAGAAGAGTTCTTCCCTCGCCAAAGGGTGAGGCATTACATCAACGAAATTAATATTCACCCACCCTGCGAAACCGTTACCAATTCCCGAAAGAGGCTTGCCGGAATATCCTCCCCTTCATGTCGGCGACCAGTGAAGACCACTGTGGCAGCCGCCACCACCCCAACCACAGCCACCACCAATAACAACAATGGCAGAAAGTACCGTGGTGTAAGACAAAGGCCATGGGGTAAATGGGCGGCGGAGATTCGAGATCCAAACCGGCACATCCGAGTTTGGCTGGGAACTTTTGACACTGCCGAAGAAGCTGCCAGGGAGTATGATAATGCCGCGATCAAGTTTCGCGGTCCGAAAGCTCTAACCAACTTTCCGATATCACCACCATCACAAGAAAAGAATGTAGACATCTACGACTCATCATGCGAAGATGAGTGCCTCGTCAACATGTCTTCATCACCTACTTCGGTTCTCCATTCCACAAGTCCCAAAACAGGAAAACCACAGAAGCACCACAAAGAAAACGATGGAGAGTGTGAGGGGGAGACGAGTTTCTTTGATGATGAGACGTTGGGGAATGACATGTTTAACTTTGCAACTTTGCATGATGAGTGTGTGGCTACAATGTTTGATGATGAAACTACTTCTGCACGGGTCTTTGTTAGTGAAAGTTTCAAGTTTGGTGACCACATTGAGCTTGGTAATGCAAGTTTGTACCAGGTTGACGATTATTTTGAAGAAATTTTGCTAGGCTCGGATCCTCTTGTGGTGCTGTGA | 948 | 0.4536 | MEQSIPIKQTRHRSVTNKFMKQKKNFDLVHLNDPISRKPKVIRIFLTDQDATDSSGDEEEEFFPRQRVRHYINEINIHPPCETVTNSRKRLAGISSPSCRRPVKTTVAAATTPTTATTNNNNGRKYRGVRQRPWGKWAAEIRDPNRHIRVWLGTFDTAEEAAREYDNAAIKFRGPKALTNFPISPPSQEKNVDIYDSSCEDECLVNMSSSPTSVLHSTSPKTGKPQKHHKENDGECEGETSFFDDETLGNDMFNFATLHDECVATMFDDETTSARVFVSESFKFGDHIELGNASLYQVDDYFEEILLGSDPLVVL | 315 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip06g03077 | 315 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 5 | 306 | - | - | |
Aip06g03077 | 315 | SMART | rav1_2 | 125 | 188 | IPR001471 | GO:0003700|GO:0006355 | |
Aip06g03077 | 315 | MobiDBLite | consensus disorder prediction | 209 | 237 | - | - | |
Aip06g03077 | 315 | PRINTS | Ethylene responsive element binding protein signature | 126 | 137 | IPR001471 | GO:0003700|GO:0006355 | |
Aip06g03077 | 315 | PRINTS | Ethylene responsive element binding protein signature | 148 | 164 | IPR001471 | GO:0003700|GO:0006355 | |
Aip06g03077 | 315 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-LIKE | 5 | 306 | - | - | |
Aip06g03077 | 315 | Pfam | AP2 domain | 125 | 174 | IPR001471 | GO:0003700|GO:0006355 | |
Aip06g03077 | 315 | Gene3D | AP2/ERF domain | 124 | 184 | IPR036955 | GO:0003700|GO:0006355 | |
Aip06g03077 | 315 | SUPERFAMILY | DNA-binding domain | 125 | 184 | IPR016177 | GO:0003677 | |
Aip06g03077 | 315 | CDD | AP2 | 125 | 184 | IPR001471 | GO:0003700|GO:0006355 | |
Aip06g03077 | 315 | ProSiteProfiles | AP2/ERF domain profile. | 125 | 182 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip06g03077 | Aip-Chr6 | 125805986 | 125806933 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip06g03077 | 6 | 216 | AP2-EREBP Transcription Factor Family | AT4G27950 | 44.144 | 2.15e-50 | 168 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Aip06g03077 | AP2 | 1.8e-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip06g03077 | - | - | adu:107494931 | 611.298 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip06g03077 | 06 | 125805986 | 125806933 | Aip06g03077 | 06 | 125805986 | 125806933 | ECH |