Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03061 ATGGCACGGATTGCCAGGTCCTCTGCGCCGCGCCTACTCTACACCTTCTTCTCCTCCTCCGTGCCCCCGGCATCCCCATCGCCATCTCCGTCTCCGGCGTCGTCCCTCCTTGCCGGTGCATTCCACCTGCGGCACTTCTCGTCGGGCAACGCTGCTCGAGCGAGGGCGGCGGCGGCGGACAAGGAGCCATGGTGGAAGGAGTCCATGGAGCGGTTACGCAACATCGGGATCTCTGCTCACATCGACTCCGGCAAGACAACTTTGACGGAGCGAGTGCTTTTCTACACTGGTCGTATCCACGAGATCCACGAGGTTCGGGGCAGAGACGGCGTCGGCGCCAAGATGGATTCCATGGACTTGGAGGAGGGAGAACGTATCACTATCCAGTCTGCTGCTACTTACTGCTCTTGGAAAGACTATAAGATTAACATAATTGACACACCTGGTCACGTTGATTTCACCATTGAAGTTGAGAGGGCTTTGCGTGTCCTTGATGGTGCTATTCTTGTACTTTGTAGTGTTGGTGGTGTGCAAAGTCAGTCCATCACAGTAGATCGACAAATGAGAAGATACGAGGTTCCAAGACTTGCATTTATTAACAAGCTTGATCGGATGGGAGCAGATCCATGGAAAGTTTTAAATCAGGCACGATCTAAGCTTCGGCATCATAGTGCTGCAATGCAAGTTCCGATAGGCTTGGAGGATGATTTTGAGGGACTTGTTGATCTTGTGCAATTAAAAGCATACTATTTTCGGGGTTCTAATGGTGAAAAAGTTGTCACTGAAGAGGTGCCTGCAGATATGGAAGCCTTGGTAGCAGAAAAAAGGCGTGAGCTCATAGAAGCTGTGTCAGAAGTTGATGATCAACTTGCTGAAGCTTTTCTTGGTGATGAGCCCATATCACCTGCTGACCTTCAGGAAGCAATTCGTAGGGCCACCATAGCACGGAAGTTTGTACCTGTGTTCATGGGTAGTGCTTTTAAAAATAAGGGAGTACAGCCACTTCTGGATGGTGTACTTAATTATTTGCCATGTCCAATTGAAGTTAGTAGTTATGCCCTTGACCAAACAAAGAATGAGGAAAAGGTTGAGTTGACTGGAAGTCCTGATGGGCCACTTGTAGCGTTGGCATTTAAGTTGGAGGAAGGGCGGTTTGGCCAGTTGACATATTTAAGAATTTACGAGGGTGTGATCCGCAAGGGCGAGTTTATTATTAATGTAAACACCGGCAAGAAGATCAAGGTTCCTCGCTTAGTTAGGATGCATTCTGATGAGATGGAGGACATTCAAGAGGCTCATGCAGGGCAAATAGTTGCTGTATTTGGTGTTGATTGTGCATCAGGAGATACGTTTACTGATGGATCAGTTAAATACACAATGACTTCCATGAATGTTCCTGAACCTGTAATGTCATTAGCTGTACAGCCAGTTTCAAAAGATTCTGGAGGGCAATTTTCAAAAGCTTTGAATCGCTTCCAGAAAGAGGATCCTACATTCCGTGTTGGTTTAGACCCAGAGAGTGGGCAGACTATCATTTCTGGCATGGGAGAACTACATTTAGATATTTATGTTGAACGTATTCGGAGAGAGTATAAGGTTGATGCAACTGTTGGAAAGCCCCGTGTAAACTTCAGAGAAACTGTTACACAACGTGCTGATTTTGATTATTTACACAAGAAGCAATCTGGAGGGCAAGGTCAATATGGACGGGTAATCGGGTATATTGAACCACTTCCGGCAGGATCACCAACTAAATTCGAATTTGAAAACCTCCTTGTTGGGCAAGCTATTCCATCAGGTTTTATCCCTGCAATTGAAAAAGGTTTTAAGGAGCCGCCAACTCGGGGGCTTTAA 1854 0.4676 MARIARSSAPRLLYTFFSSSVPPASPSPSPSPASSLLAGAFHLRHFSSGNAARARAAAADKEPWWKESMERLRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEEGERITIQSAATYCSWKDYKINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLNQARSKLRHHSAAMQVPIGLEDDFEGLVDLVQLKAYYFRGSNGEKVVTEEVPADMEALVAEKRRELIEAVSEVDDQLAEAFLGDEPISPADLQEAIRRATIARKFVPVFMGSAFKNKGVQPLLDGVLNYLPCPIEVSSYALDQTKNEEKVELTGSPDGPLVALAFKLEEGRFGQLTYLRIYEGVIRKGEFIINVNTGKKIKVPRLVRMHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKDSGGQFSKALNRFQKEDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDATVGKPRVNFRETVTQRADFDYLHKKQSGGQGQYGRVIGYIEPLPAGSPTKFEFENLLVGQAIPSGFIPAIEKGFKEPPTRGL 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03061 617 Gene3D - 546 617 IPR014721 -
Aip06g03061 617 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 1 612 IPR045044 -
Aip06g03061 617 CDD EF-G 74 346 - -
Aip06g03061 617 SUPERFAMILY Translation proteins 311 463 IPR009000 -
Aip06g03061 617 Pfam Elongation factor Tu domain 2 386 452 IPR004161 GO:0005525
Aip06g03061 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 344 IPR027417 -
Aip06g03061 617 PRINTS GTP-binding elongation factor signature 143 153 IPR000795 GO:0003924|GO:0005525
Aip06g03061 617 PRINTS GTP-binding elongation factor signature 74 87 IPR000795 GO:0003924|GO:0005525
Aip06g03061 617 PRINTS GTP-binding elongation factor signature 159 170 IPR000795 GO:0003924|GO:0005525
Aip06g03061 617 PRINTS GTP-binding elongation factor signature 195 204 IPR000795 GO:0003924|GO:0005525
Aip06g03061 617 SUPERFAMILY EF-G C-terminal domain-like 463 540 IPR035647 -
Aip06g03061 617 TIGRFAM EF-G: translation elongation factor G 68 612 IPR004540 GO:0003746|GO:0005525|GO:0006414
Aip06g03061 617 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 70 347 IPR000795 GO:0003924|GO:0005525
Aip06g03061 617 TIGRFAM small_GTP: small GTP-binding protein domain 72 244 IPR005225 GO:0005525
Aip06g03061 617 Gene3D - 59 349 IPR027417 -
Aip06g03061 617 Pfam Elongation factor Tu GTP binding domain 71 344 IPR000795 GO:0003924|GO:0005525
Aip06g03061 617 Pfam Elongation factor G, domain IV 540 613 IPR005517 GO:0005525
Aip06g03061 617 Gene3D Translation factors 354 471 - -
Aip06g03061 617 Pfam Elongation Factor G, domain III 465 539 IPR041095 -
Aip06g03061 617 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 1 612 - -
Aip06g03061 617 CDD mtEFG1_II_like 373 453 - -
Aip06g03061 617 CDD EFG_III 466 541 IPR009022 -
Aip06g03061 617 Gene3D Elongation Factor G (Translational Gtpase), domain 3 472 545 - -
Aip06g03061 617 SUPERFAMILY Ribosomal protein S5 domain 2-like 540 616 IPR020568 -
Aip06g03061 617 SMART EFG_IV_2 541 617 IPR005517 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03061 Aip-Chr6 125586815 125596996 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03061 388 548 Eukaryotic Initiation Factors Gene Family AT3G22980 24.719 4.16e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03061 K02355 - gmx:100783315 1092.8