Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03038 ATGCTGCCGGCAAGGAAGCGGCGAGGGCGACGGCCACGGACGACACAAGTTGTTAACTTTGGGACGCCGAAAAATGAAGTTCCGAGTGATAATAATGTTGACCTTGACAAAGACGCCAAAGACGATGATGGAGCTACAAATTCCTCTCTTGTTCAGAACTCCAAGGGAACAAGGCAGGACAGAAAGCGAAAGATGGCGAAGATTTCTAGTAACGTCGGAACTAGCAGCAGAAGCAGGGCTGAGAGTGAAGAGGATGAAAATGGTTATTCGACGGCGACGGAAAGTGAACTTCCGAGTGATAATGTTGAGCTTGGGTTGGATAAAGATTCTCAAAAGGACGTCGCCAACGGCAGGAGGTTCCTACTTCGGAAGCATCCACAGGAGACACCCAAATTCATTAGGAGAGGCCCTAAATTTTTTGAAGAGGAGAGCTTAATGTGCCATCAATGTCAGAGAAATGACAAAGGTGACGTTGTGAGGTGCAAAAATTGCAAGCGGAAAAGATTCTGTATGCCTTGTTTGGCTAGCTGGTATCCTGAATTAAAGCCGGAGGATGCAGTGTTATGTCCGGTTTGCCGTGGTAATTGCAACTGCAGAGCATGCTTGCGATCTACAGAATTAAGTGAGGCAATGAGGCGTCGTCGTGTGCCAAGGAACGAACAGGAGAGATTTGAGCATTCTAAGTATTTGCTAAAACGGCTTCTTCCTTATTTAAGACAGTTGGATAAAGAACAAATGATTGAGAAGGATATAGAAGCTAAGAGGAAAGGGCTTTCACTCCCGAAGCTAAATATTGAAAAGTCAGAGTACTGTAAACATGAACGTGTCCACTGTGATAACTGCAAGACGTCAATATTTGACTACCACAGATTCTGTAGAAAATGTTCTTTCCGCCTTTGTCTTATCTGTTGCTATGAGCTTCGCAATGGAGAGCTACTAGGTGGTGCAGATCCAGATGAGCTTGGATTTGTCAACTGGGGTATCAATTATCTGCATGGTTGTGAATATATAAGTGGAGTCAAGTCGAATTCAGCACATGAGGATGCTAAGCCTGACTCTAAGAAGAATTTAGCGCATTCTGATGCTAAGCCTGATGTTCGTGGATGGTCAAGATCTGGGTGGCATGCAAAGAGCGATGGCAGCATTCCTTGCCCAAAGAATAAGTGTCGCAACAGGTTTCTTGAACTGAGAAGTGTACTTGGTCCAAATTTTATCTCAGAGTTAGTACACAAAGCAGAAGAAGCAGAAGCACATAAGCTTCACAATGCAGTTGAGAATCCTGTTAGCTGGTGTTCATGTTTGAGGCTCAGCAGAAACACAGATTGTAGAAGTAATAATAATACACTGAAGGCGGCTTCTCGTGAAAATTCCATTGACAACTTTTTGTACCATCCTCAGGCTATAAGTCAAAAACCTGAAGAGTTGAAACATTTTCAATGTCATTGGAGTAGAGGCGAGCCTGTTATTGTAAGCAATGTGCTTGAACGTACATCTGGTTTAAGCTGGGAACCACTAGTCATGTGGCGTGCATTCCGATTGACTAATATGGGCAAGGGTAATCAACATTTGGATATGAAGGCACTTGACTGCCTAAATTGGGCACAGGGAGATATTAATATCCACCAATTCTTTACTGGGTACACAACTGGTCGTTGGGATTGGTGTGGTTGGCCTCAGATGCTGAGATTAAATGATTGGCCCCCTGATTTCTTCAAGGAACGTGCACCACGTCACTATGCAGAATTTATGTCTTTATTGCCCTTTGGGGAATATACACATCCTTTTGGAGGTGTTCTTAATCTTGCTTCTAAAGTACCACGGACTGGTTCAACACCTAACATGGAGCCAAAAGCATATATTGCATATGGATTTCCTCAAGAGCTTGGACGTGGTGATTCTGTGGTTAAACTCCACTATGATATTTCTGATACAGTTAATATTTTAACTCATACTGCTGAAAAAGTGAGGTTGACATCTGACCAACTTAGAACGATTGAGCATTTGAAACGGAAGCACCATGACCAAGACAAGAGAGAGCTCCTTGTAACTTATCAGGAAGAAAGCAATATATTAGCTGGAGGGGATGCTTCTGATGGTGTCCTTTGGGATGTTTTCCGGAGACAGGATATTCCTGTGTTAAAGGAATATCTGAAAAAGCATTTCAAGGAGTTCAGACATAACTATTGCTGTCCCTTAAATAAGGTTATTCACCCCATTCATGATCAAACCATCTATCTGACTGTGGGACATAAGAGGAAGCTAAAGGAGGAGTATGGAATTGAGCCCTGGACTTTCATTCAGAAGTTAGGAGATGCTGTTTTTATTCCAGCGGGATGTCCATACCAAGTTAGAAATCTGAAGTCATGCATCAATGTTGCGCTTAGTTTTGTGTCTCCTGAAAGTGTTGGCGAGTGTTTTCGTTTGGCAGAGGAAATCCGCACACTTCCGATAAATCATAGGTCGAGCGAGGACAAGTTGGAGGTGAAGAAAATGACAATATTTGCTATAAATGATGTCCTTGAAAACTTGTCAAGAGCAAGCTTGAATGAAAATCTGAAACCTGAAAGGAATATCCAAGAAAAGCAGCCGACCGGAGAAAAGGATAAATGGGACGAGTATACAACCGGAGTTTTCTTGGACGTATGTGTTGAGGAAATAGCTTCAGGGAATAGAGCTGACGCTGACTTCAATGAAGAGGGATGGATTAATGTAATTGCTAAGTTCAATGGAAAAACAGGTCGTAACTATGACTGCAGGCAATTGAAAGATAAATGGGACATTTTGAAAGGTGACTTTAATTTATGGGAAAAGCTTCTTGAAATTGGTGTGGGATGGGATCCTGTTAAAAAAACCATAAAAGCATCTCAAGAGTTTTGGGTAGCTAGAAGAAAGGAGAACCCAGAATTTCTGAAATTTAGGTTTCAATGTCCTTCACACTTGGATAAGTTGGAAGCATGTTTTAAAGATACGAAGGCTACAGGTGATGTAGCTTTGAAAACACATGCAGATCCATCATCAGCTGAGGTGAGGGTATGTGGGAAAGAAAATGAGGACAATCATGAATTAGGGGCTTTTGGTGAGGGTGTTAGGGACAGTGATAGTGTTGCTTATGAAGAACCTCATACTTCATATAGTGGTGGCCACACTACTTCAAATGATAATCCAAATAAAAGGCAGATACAGCTAAATGATAAAAAACAATTTGGTAAAGTCAATAAGCTTCAACATTCTGTTAGCGTGTCTTTGGAGGAAGAGGAACATAGCATCCCTCTGGAAGTGACACATAGAAGAGCTCCTCAAGAGAATCAGCCAATTCCAGACAATGATAAATGGGATGATTTCACAATAGGAGTTTTCTTGGAAGTATGTATTCAGGAAATAGCTGCTGGGAATAGGCCTCATGATGACTTTAACAAAGAGGGATGGAACAATGTGGTTGCCAAGTTTAATGGAAAAACTGGTCAAAATTATGATCATAGGCAATTGAAAAAGGAACTGGACAATCTAAAAAATGATTTTACTTTATGGGCAAAGCTTGTTGAAAATCAAACTGGTTTAGGATGGGATCCTATTAAAAAAACTGTCAAAGCACCTCCCAGATTTTGGGAATCCAGAAAAAAGGAGAACCCTGCATTTCTAAAGTTTGAGCATCAAGGTCCTCCACACTTAGATAAGTTGGAAGCTTGCTTTGAAGATGCTAAAGGTACAAGTTATGTAGCTATATATGCAGATCCATCATCAAATGGGGTGGGTTTTTATGGTGAAGAGAATGAGGATAATCTTGAATTAAGGGCTTCCAATGAGGATGATGGGGACAGTGGTGATGTTGCTATTGAAGAAACTCATCATACACAGAATGTGCAGCATAGGGAATATAATGAGAATAATCCTGAATTAAGGGCCTCTGAGGAGGGTTTCAGTGATGATGATGTTGCTATTGAAGAAACTCATCATATGCATAATGTAGAGCCTAGGAAAGAGAATGAGAATAATCCCGAACTAAGGGCTTCCGATGAGGGTGTCAGTAGTGCTGATGTTACCATTAGGGAAGAGAATGAGAATAATCCTGAATCAAGGGCTTTTGATGAGGGTGTCTCCGGCAGTGATGTTGCTATTGACAAAACTCATGATACGCATAATGTGGTACTTAGTGAAGAGAATGAGGATAATCCTGAATTAAGGGCTTCCCATGAAGGGGATGGTGATGTTGTTGGCATTGCTAATCTGGAGCCTCTTGGAGAGAATGAGGATAACCTTGAATTAAGGGCTTCTGATGAGGGTGTTGGGGATGGTGATGGTGTTGCTAATAAAGAAACTTATCATTCACATAATGCAGAGCCTGGTCCTTCAAATAGTGTTCCGAAGAAAAGGAAGAGACTGAGGAAAAGACTGAGGAAAGCTAAGAAGCATTCTGGTAAAGCAGTTAAGGCACGACATTACCTTCATTGCATAGTTGATGGATTGACTAGTGTGCCAAAAGCAAATAATACTGCCACTGGTTTTGAATGTAATCTGGATTTGGATAGCTGTCTGACGTTACTTGATAGTGTGCCTGGTCTCGAGAAAGGAAGTACTTTGTACTTCATTGCCTGCAGAGTTCTTACAAAGATTGTTAACAGGCAAACTTTTGTGCATTTGATGCGAGATGATCCTAAGTTGGCATTTGGTTGGCTCAACACTTTTACATTGGAGGACCTAAAGAATTTGACTGGCTGA 4716 0.415 MLPARKRRGRRPRTTQVVNFGTPKNEVPSDNNVDLDKDAKDDDGATNSSLVQNSKGTRQDRKRKMAKISSNVGTSSRSRAESEEDENGYSTATESELPSDNVELGLDKDSQKDVANGRRFLLRKHPQETPKFIRRGPKFFEEESLMCHQCQRNDKGDVVRCKNCKRKRFCMPCLASWYPELKPEDAVLCPVCRGNCNCRACLRSTELSEAMRRRRVPRNEQERFEHSKYLLKRLLPYLRQLDKEQMIEKDIEAKRKGLSLPKLNIEKSEYCKHERVHCDNCKTSIFDYHRFCRKCSFRLCLICCYELRNGELLGGADPDELGFVNWGINYLHGCEYISGVKSNSAHEDAKPDSKKNLAHSDAKPDVRGWSRSGWHAKSDGSIPCPKNKCRNRFLELRSVLGPNFISELVHKAEEAEAHKLHNAVENPVSWCSCLRLSRNTDCRSNNNTLKAASRENSIDNFLYHPQAISQKPEELKHFQCHWSRGEPVIVSNVLERTSGLSWEPLVMWRAFRLTNMGKGNQHLDMKALDCLNWAQGDINIHQFFTGYTTGRWDWCGWPQMLRLNDWPPDFFKERAPRHYAEFMSLLPFGEYTHPFGGVLNLASKVPRTGSTPNMEPKAYIAYGFPQELGRGDSVVKLHYDISDTVNILTHTAEKVRLTSDQLRTIEHLKRKHHDQDKRELLVTYQEESNILAGGDASDGVLWDVFRRQDIPVLKEYLKKHFKEFRHNYCCPLNKVIHPIHDQTIYLTVGHKRKLKEEYGIEPWTFIQKLGDAVFIPAGCPYQVRNLKSCINVALSFVSPESVGECFRLAEEIRTLPINHRSSEDKLEVKKMTIFAINDVLENLSRASLNENLKPERNIQEKQPTGEKDKWDEYTTGVFLDVCVEEIASGNRADADFNEEGWINVIAKFNGKTGRNYDCRQLKDKWDILKGDFNLWEKLLEIGVGWDPVKKTIKASQEFWVARRKENPEFLKFRFQCPSHLDKLEACFKDTKATGDVALKTHADPSSAEVRVCGKENEDNHELGAFGEGVRDSDSVAYEEPHTSYSGGHTTSNDNPNKRQIQLNDKKQFGKVNKLQHSVSVSLEEEEHSIPLEVTHRRAPQENQPIPDNDKWDDFTIGVFLEVCIQEIAAGNRPHDDFNKEGWNNVVAKFNGKTGQNYDHRQLKKELDNLKNDFTLWAKLVENQTGLGWDPIKKTVKAPPRFWESRKKENPAFLKFEHQGPPHLDKLEACFEDAKGTSYVAIYADPSSNGVGFYGEENEDNLELRASNEDDGDSGDVAIEETHHTQNVQHREYNENNPELRASEEGFSDDDVAIEETHHMHNVEPRKENENNPELRASDEGVSSADVTIREENENNPESRAFDEGVSGSDVAIDKTHDTHNVVLSEENEDNPELRASHEGDGDVVGIANLEPLGENEDNLELRASDEGVGDGDGVANKETYHSHNAEPGPSNSVPKKRKRLRKRLRKAKKHSGKAVKARHYLHCIVDGLTSVPKANNTATGFECNLDLDSCLTLLDSVPGLEKGSTLYFIACRVLTKIVNRQTFVHLMRDDPKLAFGWLNTFTLEDLKNLTG 1571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03038 1571 Pfam Myb/SANT-like DNA-binding domain 1111 1203 IPR024752 -
Aip06g03038 1571 Pfam Myb/SANT-like DNA-binding domain 869 959 IPR024752 -
Aip06g03038 1571 MobiDBLite consensus disorder prediction 1317 1334 - -
Aip06g03038 1571 SUPERFAMILY Clavaminate synthase-like 471 831 - -
Aip06g03038 1571 MobiDBLite consensus disorder prediction 1281 1302 - -
Aip06g03038 1571 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 39 845 IPR045109 GO:0032454|GO:0033169
Aip06g03038 1571 MobiDBLite consensus disorder prediction 1 109 - -
Aip06g03038 1571 MobiDBLite consensus disorder prediction 1317 1343 - -
Aip06g03038 1571 MobiDBLite consensus disorder prediction 345 372 - -
Aip06g03038 1571 MobiDBLite consensus disorder prediction 15 29 - -
Aip06g03038 1571 Gene3D Cupin 462 822 - -
Aip06g03038 1571 MobiDBLite consensus disorder prediction 1423 1470 - -
Aip06g03038 1571 ProSiteProfiles JmjC domain profile. 594 813 IPR003347 -
Aip06g03038 1571 MobiDBLite consensus disorder prediction 1037 1056 - -
Aip06g03038 1571 MobiDBLite consensus disorder prediction 30 44 - -
Aip06g03038 1571 MobiDBLite consensus disorder prediction 1454 1470 - -
Aip06g03038 1571 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 142 207 IPR018866 -
Aip06g03038 1571 MobiDBLite consensus disorder prediction 345 374 - -
Aip06g03038 1571 Pfam JmjC domain, hydroxylase 700 796 IPR003347 -
Aip06g03038 1571 ProSiteProfiles Zinc finger RING-type profile. 147 193 IPR001841 -
Aip06g03038 1571 SMART cupin_9 575 813 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03038 Aip-Chr6 125066878 125087361 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aip06g03038 JmjC 3e-12 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03038 K15601 - mnt:21406437 801.971