Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03027 ATGACAACAGTAGAAGGTTGTGGAAAGCCATATGCCCTCCTCGCCGCCACTGCTAGCGGCATCCCTCACTTAGAACTCCGCCGTCTCAGCCTCGCCTCTCACCGTCGCGCCGTCTCTCCTCTGCCTCTTGCCTCTGCTTCTCGCTGTGCCTCCTTCCCTCGCCGTCACGAGTCTCACCGCGTGGTCCCTACCTCGCCATCCATCTCTAGACTTCAGAGAGACAGAAATGGAATCACAAGAGACATCTTCAGTAGGAGCAGAAGCACTTCTACATATGTCTCCTGGATCAGCGGTGTGTATTGTTATAGGGTGGTAATAAGAGGACTGCCCGATGAAGACGCAGTTCTTTGTACTCAATCCAAAACATTTGCAATGAAGTTCGTTGGAACTTCAAATTCTGTTTTGCTTATACCTCCTGCAAATCAATATGTTTTTGATCAAAATCCACAAAACGGTGCAAATAATCACAAGGAGAAGAACCCTTGCAGGCTTGAAGAGTTTGACAGTTCAGAAGTGAATCCAGAAAGTAGAGCAGGATTATATAACTGGAAGGATCTTAAAAACAATATTCAAGCTAGTGACGAGGAACTAAGATCCGGACTGCAGGCACTATCGGCTGTGGAGATTAATAGCTATTGGAGACTAGTAGACGAGAGATACATGAACACGATTCTGGAAATGGTTTTGAGAAATGCAGTGTTGAACGACTGGTCACTGAGTGCTCTTAATGAAGATGAAGTCGTAAGCATGCTGGTTTCTGATGGATTTCCTGCAGAACTTGCAAGGCATTGCTTGCACGTATATGGTGAGAAAGTAATTGACGGCACGGATACTTGTGCATGGAAGTTAGACAAGAAGCGGGTCTGCATTCATTTTGCGAGAGAAATCCTGAGAGGGGGCAAGATGAAGCTGGAGAGTTTTATGGATGAGTGGAGGCAGAGGACTCCAGATGAAATGCAGCCAACTTTTGATCTTGCCGAAGGAGAAGTTTTGACAGAGAGAATTGGAGTCGAGACATGGGTCCGCGGATTCAGTGTCTCTTCGTTGCCATCCACTCCGGCTGAACGATTCTCGATTCTTTTCAAAGAGCGGCCAAAATGGGAATGGAAAGATCTGCAGCCTTATATTAGGGATCTGAATGTGCCAGGTCTTACTTCTGAAGGTTTGCTATTGAAATATACTCGAAGAACACAACCATCACCTGAAATAGAACCAATTTTCAGTGCAAGATAG 1233 0.4599 MTTVEGCGKPYALLAATASGIPHLELRRLSLASHRRAVSPLPLASASRCASFPRRHESHRVVPTSPSISRLQRDRNGITRDIFSRSRSTSTYVSWISGVYCYRVVIRGLPDEDAVLCTQSKTFAMKFVGTSNSVLLIPPANQYVFDQNPQNGANNHKEKNPCRLEEFDSSEVNPESRAGLYNWKDLKNNIQASDEELRSGLQALSAVEINSYWRLVDERYMNTILEMVLRNAVLNDWSLSALNEDEVVSMLVSDGFPAELARHCLHVYGEKVIDGTDTCAWKLDKKRVCIHFAREILRGGKMKLESFMDEWRQRTPDEMQPTFDLAEGEVLTERIGVETWVRGFSVSSLPSTPAERFSILFKERPKWEWKDLQPYIRDLNVPGLTSEGLLLKYTRRTQPSPEIEPIFSAR 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03027 410 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 169 410 IPR019128 GO:0007064|GO:0031390
Aip06g03027 410 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 103 154 IPR019128 GO:0007064|GO:0031390
Aip06g03027 410 Pfam Sister chromatid cohesion protein Dcc1 103 148 IPR019128 GO:0007064|GO:0031390
Aip06g03027 410 Pfam Sister chromatid cohesion protein Dcc1 165 376 IPR019128 GO:0007064|GO:0031390
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03027 96 410 C3H Transcription Factor Family AT2G44580 52.422 4.09e-123 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03027 K11271 - gmx:100817511 459.914